Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 KATNBL1P6-201ENST00000453433 915 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AL445433.1-201ENST00000457507 257 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 SRRM1P2-201ENST00000464531 1192 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 MIR4504-201ENST00000577413 92 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 MIR3138-201ENST00000585238 82 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC020914.6-201ENST00000594327 272 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC073544.2-201ENST00000601155 540 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 RNF138P2-201ENST00000603490 592 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AL359535.1-201ENST00000612100 1087 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AL355073.2-201ENST00000612106 557 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC131238.1-201ENST00000617135 328 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AP005019.3-201ENST00000620418 560 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AL161637.1-201ENST00000622380 412 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC099063.3-201ENST00000642066 185 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AL118496.1-201ENST00000440201 1812 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 SMG1P6-201ENST00000532337 2930 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 RPL21P132-201ENST00000331267 462 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 RNU1-82P-201ENST00000390851 165 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 LAP3P1-201ENST00000403648 294 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AL591848.1-201ENST00000413092 322 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 RPS15AP38-201ENST00000413110 372 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 C8orf59P1-201ENST00000429930 303 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC105402.2-201ENST00000438503 358 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 BMI1P1-201ENST00000445879 941 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 VN1R10P-201ENST00000447106 875 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 RPL26P28-201ENST00000451325 435 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 MTCO3P11-201ENST00000455103 774 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 RPL23AP24-201ENST00000458203 385 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 RN7SL558P-201ENST00000497468 299 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 DSTNP2-201ENST00000504533 515 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC007016.1-201ENST00000512110 244 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 PSMB7P1-201ENST00000556349 514 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 CYCSP2-201ENST00000558168 301 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 SULT1C2P1-202ENST00000562418 459 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 U73023.1-201ENST00000603134 700 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC008782.1-201ENST00000603386 430 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC083899.3-201ENST00000603413 594 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC067959.1-201ENST00000604334 379 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC024941.1-201ENST00000612250 334 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC018755.4-201ENST00000619715 454 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 BX005214.3-202ENST00000619809 325 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AC231657.1-201ENST00000624313 397 ntBASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A4Q53GD3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms