Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC092724.1-201ENST00000624623 3397 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 RNU6-545P-201ENST00000362681 104 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 RNU6-1252P-201ENST00000363054 104 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 Y_RNA.222-201ENST00000364264 102 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 RNU4-48P-201ENST00000365559 182 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 RNU6-244P-201ENST00000391028 104 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AL606923.1-201ENST00000406616 190 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 RNA5SP487-201ENST00000410186 122 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AL354868.1-201ENST00000417077 482 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 ATG3P1-201ENST00000419507 911 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 CHIAP3-201ENST00000423668 1133 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AL731534.1-201ENST00000434711 269 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 RPS3AP38-201ENST00000435889 763 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC005019.1-201ENST00000436455 431 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 RPL23AP11-201ENST00000475260 469 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 HSPD1P15-201ENST00000505573 1122 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AP002770.2-201ENST00000543613 532 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC027229.1-201ENST00000583887 253 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC067852.5-201ENST00000589299 310 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC139493.1-201ENST00000604368 397 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AL354984.3-201ENST00000604803 325 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 CYCSP1-201ENST00000604815 315 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AL445647.2-201ENST00000615170 130 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC009237.17-201ENST00000618111 748 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC145207.9-201ENST00000623802 325 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AL353662.3-201ENST00000625131 237 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC026634.1-201ENST00000634369 198 ntBASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RSPO4Q2I0M5 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 SNORD113-7-201ENST00000363762 77 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 Y_RNA.212-201ENST00000364177 102 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 Y_RNA.428-201ENST00000384078 102 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 MIR433-201ENST00000384837 93 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 SNORA75.6-201ENST00000391318 127 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 PPIAP9-201ENST00000403866 498 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 RNU2-36P-201ENST00000410361 191 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 RNA5SP345-201ENST00000410646 108 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 RN7SKP27-201ENST00000410684 333 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AC048351.1-201ENST00000420064 602 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 EIF1P2-201ENST00000428233 350 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AC090142.1-201ENST00000465776 462 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.65□□□□□ -1.5
RSPO4Q2I0M5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms