Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC1.79□□□□□ -2.12
HSPG2P98160 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 DMD-211ENST00000378707 7410 ntTSL 5 BASIC1.79□□□□□ -2.12
HSPG2P98160 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HSPG2P98160 GLRXP1-201ENST00000423261 334 ntBASIC1.79□□□□□ -2.12
HSPG2P98160 TRIM60P18-201ENST00000441518 828 ntBASIC1.79□□□□□ -2.12
HSPG2P98160 AL591623.2-201ENST00000449978 222 ntBASIC1.79□□□□□ -2.12
HSPG2P98160 AP000926.3-201ENST00000497201 299 ntBASIC1.79□□□□□ -2.12
HSPG2P98160 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC1.79□□□□□ -2.12
HSPG2P98160 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.79□□□□□ -2.12
HSPG2P98160 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC1.79□□□□□ -2.12
HSPG2P98160 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.79□□□□□ -2.12
HSPG2P98160 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC1.79□□□□□ -2.12
HSPG2P98160 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HSPG2P98160 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 RNU6-482P-201ENST00000391068 107 ntBASIC1.79□□□□□ -2.12
HSPG2P98160 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC1.79□□□□□ -2.12
HSPG2P98160 IL7R-208ENST00000511982 612 ntTSL 2 BASIC1.79□□□□□ -2.12
HSPG2P98160 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 AP000942.3-201ENST00000603702 160 ntBASIC1.79□□□□□ -2.12
HSPG2P98160 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC1.79□□□□□ -2.12
HSPG2P98160 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HSPG2P98160 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.78□□□□□ -2.12
HSPG2P98160 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HSPG2P98160 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.78□□□□□ -2.12
HSPG2P98160 HSPA8P1-201ENST00000425843 1833 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC1.78□□□□□ -2.12
HSPG2P98160 AC087499.2-201ENST00000432861 149 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 RPS26P3-201ENST00000470205 348 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.78□□□□□ -2.12
HSPG2P98160 AC005351.1-201ENST00000511152 786 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.78□□□□□ -2.12
HSPG2P98160 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.78□□□□□ -2.12
HSPG2P98160 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.78□□□□□ -2.12
HSPG2P98160 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC1.78□□□□□ -2.12
HSPG2P98160 SYT14P1-202ENST00000600441 1448 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 AC079228.1-201ENST00000624774 1049 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 PISRT1-201ENST00000626175 531 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
HSPG2P98160 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HSPG2P98160 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.78□□□□□ -2.12
HSPG2P98160 LINC01355-201ENST00000566551 5444 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
HSPG2P98160 Y_RNA.118-201ENST00000363300 101 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 RNVU1-3-201ENST00000364313 161 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.78□□□□□ -2.12
HSPG2P98160 RN7SKP192-201ENST00000411291 327 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 HMGB3P12-201ENST00000438745 556 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 NIPA2P5-201ENST00000452282 464 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 SYT14P1-201ENST00000481459 721 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 AC114967.1-201ENST00000504890 259 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 AC092436.1-201ENST00000506450 503 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC1.78□□□□□ -2.12
HSPG2P98160 BNIP3P38-201ENST00000601117 544 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.78□□□□□ -2.12
HSPG2P98160 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HSPG2P98160 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
HSPG2P98160 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC1.78□□□□□ -2.12
HSPG2P98160 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.12
HSPG2P98160 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.78□□□□□ -2.12
HSPG2P98160 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HSPG2P98160 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC1.78□□□□□ -2.12
HSPG2P98160 AL162389.1-201ENST00000449233 177 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.78□□□□□ -2.12
HSPG2P98160 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC1.78□□□□□ -2.12
HSPG2P98160 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.78□□□□□ -2.12
HSPG2P98160 HMGB1P50-201ENST00000605814 607 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 AC103810.6-201ENST00000606708 136 ntBASIC1.78□□□□□ -2.12
HSPG2P98160 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HSPG2P98160 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
HSPG2P98160 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
HSPG2P98160 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
HSPG2P98160 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HSPG2P98160 Y_RNA.355-201ENST00000365462 98 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 MIR518C-201ENST00000384822 101 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HSPG2P98160 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 AC124916.1-201ENST00000444020 547 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 AP000942.1-201ENST00000463969 747 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.77□□□□□ -2.13
HSPG2P98160 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.77□□□□□ -2.13
HSPG2P98160 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.77□□□□□ -2.13
HSPG2P98160 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
HSPG2P98160 AC020633.1-201ENST00000468439 2247 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
HSPG2P98160 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HSPG2P98160 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HSPG2P98160 AC005332.5-201ENST00000591222 2919 ntBASIC1.77□□□□□ -2.13
HSPG2P98160 RNU4-26P-201ENST00000410270 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms