Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC006270.3-201ENST00000605967 1036 ntBASIC4.68□□□□□ -1.66
COPB1P53618 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.68□□□□□ -1.66
COPB1P53618 AC245297.2-201ENST00000610119 565 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC005332.6-201ENST00000613178 446 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AL031667.3-201ENST00000620124 655 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.68□□□□□ -1.66
COPB1P53618 AP005019.3-201ENST00000620418 560 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC008443.7-201ENST00000622195 246 ntBASIC4.68□□□□□ -1.66
COPB1P53618 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.68□□□□□ -1.66
COPB1P53618 AC008013.2-202ENST00000637965 364 ntBASIC4.68□□□□□ -1.66
COPB1P53618 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.68□□□□□ -1.66
COPB1P53618 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COPB1P53618 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.68□□□□□ -1.66
COPB1P53618 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COPB1P53618 AL592148.3-201ENST00000608771 2646 ntBASIC4.68□□□□□ -1.66
COPB1P53618 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.68□□□□□ -1.66
COPB1P53618 KPNA2P2-201ENST00000419546 1489 ntBASIC4.68□□□□□ -1.66
COPB1P53618 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
COPB1P53618 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPB1P53618 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPB1P53618 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPB1P53618 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
COPB1P53618 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COPB1P53618 MTND4P4-201ENST00000439033 1366 ntBASIC4.67□□□□□ -1.66
COPB1P53618 AC096656.1-201ENST00000623826 1364 ntBASIC4.67□□□□□ -1.66
COPB1P53618 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.67□□□□□ -1.66
COPB1P53618 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COPB1P53618 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COPB1P53618 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPB1P53618 DBF4P1-201ENST00000412976 1892 ntBASIC4.67□□□□□ -1.66
COPB1P53618 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COPB1P53618 MAPK10-253ENST00000641010 4072 ntBASIC4.67□□□□□ -1.66
COPB1P53618 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.67□□□□□ -1.66
COPB1P53618 OR5P1P-201ENST00000299512 925 ntBASIC4.67□□□□□ -1.66
COPB1P53618 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
COPB1P53618 ATP5F1P4-201ENST00000397288 746 ntBASIC4.67□□□□□ -1.66
COPB1P53618 RNU6-648P-201ENST00000410190 107 ntBASIC4.67□□□□□ -1.66
COPB1P53618 BOLA3P4-201ENST00000418151 400 ntBASIC4.67□□□□□ -1.66
COPB1P53618 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.67□□□□□ -1.66
COPB1P53618 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.67□□□□□ -1.66
COPB1P53618 EIF1P3-201ENST00000423841 334 ntBASIC4.67□□□□□ -1.66
COPB1P53618 RPEP3-201ENST00000425462 676 ntBASIC4.67□□□□□ -1.66
COPB1P53618 CEACAMP1-201ENST00000434624 1035 ntBASIC4.67□□□□□ -1.66
COPB1P53618 MTCYBP39-201ENST00000437562 491 ntBASIC4.67□□□□□ -1.66
COPB1P53618 RPL23AP89-201ENST00000439324 255 ntBASIC4.67□□□□□ -1.66
COPB1P53618 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.67□□□□□ -1.66
COPB1P53618 RAB11AP1-201ENST00000442978 646 ntBASIC4.67□□□□□ -1.66
COPB1P53618 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.67□□□□□ -1.66
COPB1P53618 snoU13.1-201ENST00000459157 104 ntBASIC4.67□□□□□ -1.66
COPB1P53618 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
COPB1P53618 AC010307.1-201ENST00000467206 836 ntBASIC4.67□□□□□ -1.66
COPB1P53618 BNIP3P41-201ENST00000503774 571 ntBASIC4.67□□□□□ -1.66
COPB1P53618 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.67□□□□□ -1.66
COPB1P53618 MTATP6P22-201ENST00000507369 598 ntBASIC4.67□□□□□ -1.66
COPB1P53618 AC022447.1-201ENST00000515358 464 ntBASIC4.67□□□□□ -1.66
COPB1P53618 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.67□□□□□ -1.66
COPB1P53618 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COPB1P53618 OR5AK1P-201ENST00000524837 922 ntBASIC4.67□□□□□ -1.66
COPB1P53618 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.67□□□□□ -1.66
COPB1P53618 AC022880.1-201ENST00000534017 973 ntBASIC4.67□□□□□ -1.66
COPB1P53618 TRAV15-201ENST00000556680 249 ntBASIC4.67□□□□□ -1.66
COPB1P53618 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.67□□□□□ -1.66
COPB1P53618 AP001094.1-201ENST00000579805 193 ntBASIC4.67□□□□□ -1.66
COPB1P53618 DEFB131E-202ENST00000602581 683 ntBASIC4.67□□□□□ -1.66
COPB1P53618 AC012409.3-201ENST00000611343 981 ntBASIC4.67□□□□□ -1.66
COPB1P53618 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.67□□□□□ -1.66
COPB1P53618 AC009878.1-201ENST00000621819 340 ntBASIC4.67□□□□□ -1.66
COPB1P53618 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.67□□□□□ -1.66
COPB1P53618 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COPB1P53618 CDRT1-208ENST00000630868 794 ntBASIC4.67□□□□□ -1.66
COPB1P53618 AL392088.2-201ENST00000637607 285 ntBASIC4.67□□□□□ -1.66
COPB1P53618 AC099063.3-201ENST00000642066 185 ntBASIC4.67□□□□□ -1.66
COPB1P53618 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPB1P53618 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPB1P53618 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPB1P53618 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.67□□□□□ -1.66
COPB1P53618 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
COPB1P53618 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPB1P53618 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.67□□□□□ -1.66
COPB1P53618 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.67□□□□□ -1.66
COPB1P53618 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.66□□□□□ -1.66
COPB1P53618 ZNF962P-201ENST00000443465 3140 ntBASIC4.66□□□□□ -1.66
COPB1P53618 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COPB1P53618 OR56B2P-202ENST00000641377 2453 ntBASIC4.66□□□□□ -1.66
COPB1P53618 DHX40P1-201ENST00000588725 1412 ntBASIC4.66□□□□□ -1.66
COPB1P53618 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
COPB1P53618 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.66□□□□□ -1.66
COPB1P53618 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPB1P53618 SNORA37-201ENST00000384504 129 ntBASIC4.66□□□□□ -1.66
COPB1P53618 RNU6-1151P-201ENST00000384684 107 ntBASIC4.66□□□□□ -1.66
COPB1P53618 RNU6-253P-201ENST00000384730 105 ntBASIC4.66□□□□□ -1.66
COPB1P53618 TMSB4XP8-201ENST00000402089 135 ntBASIC4.66□□□□□ -1.66
COPB1P53618 SNORA11F-201ENST00000408237 128 ntBASIC4.66□□□□□ -1.66
COPB1P53618 Y_RNA.619-201ENST00000410951 90 ntBASIC4.66□□□□□ -1.66
COPB1P53618 RNA5SP306-201ENST00000411087 107 ntBASIC4.66□□□□□ -1.66
COPB1P53618 TPMTP3-201ENST00000411928 735 ntBASIC4.66□□□□□ -1.66
COPB1P53618 RPL7P8-201ENST00000411964 730 ntBASIC4.66□□□□□ -1.66
COPB1P53618 TMSB4XP6-201ENST00000415187 135 ntBASIC4.66□□□□□ -1.66
COPB1P53618 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms