Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.83□□□□□ -1.64
CPT1AP50416 PDCD5P1-201ENST00000543528 309 ntBASIC4.83□□□□□ -1.64
CPT1AP50416 AL121766.1-201ENST00000547436 487 ntBASIC4.83□□□□□ -1.64
CPT1AP50416 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.83□□□□□ -1.64
CPT1AP50416 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.83□□□□□ -1.64
CPT1AP50416 AC074051.3-201ENST00000570238 358 ntBASIC4.83□□□□□ -1.64
CPT1AP50416 MIR4286-201ENST00000580651 93 ntBASIC4.83□□□□□ -1.64
CPT1AP50416 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.83□□□□□ -1.64
CPT1AP50416 AL354984.3-201ENST00000604803 325 ntBASIC4.83□□□□□ -1.64
CPT1AP50416 AC069304.2-201ENST00000605154 435 ntBASIC4.83□□□□□ -1.64
CPT1AP50416 RNU4-89P-201ENST00000607443 133 ntBASIC4.83□□□□□ -1.64
CPT1AP50416 MIR6867-201ENST00000610636 67 ntBASIC4.83□□□□□ -1.64
CPT1AP50416 AL031667.3-201ENST00000620124 655 ntBASIC4.83□□□□□ -1.64
CPT1AP50416 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPT1AP50416 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.83□□□□□ -1.64
CPT1AP50416 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPT1AP50416 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPT1AP50416 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPT1AP50416 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPT1AP50416 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.82□□□□□ -1.64
CPT1AP50416 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CPT1AP50416 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CPT1AP50416 OR5BR1P-201ENST00000524992 1330 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 Y_RNA.77-201ENST00000362962 107 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 Y_RNA.436-201ENST00000384097 102 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 RNU6-1122P-201ENST00000384449 107 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 MIR506-201ENST00000384998 124 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 RPL23AP29-201ENST00000397284 453 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 DSTNP4-201ENST00000399472 474 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 RPL31P52-201ENST00000407532 367 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AL450338.1-201ENST00000407987 512 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 BTF3L4P1-201ENST00000413813 468 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.82□□□□□ -1.64
CPT1AP50416 CEACAMP1-201ENST00000434624 1035 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.82□□□□□ -1.64
CPT1AP50416 AC129850.1-201ENST00000436203 508 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 MTND2P20-201ENST00000440805 661 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 RPL21P89-201ENST00000444021 467 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.82□□□□□ -1.64
CPT1AP50416 SLC31A1P1-201ENST00000451221 567 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.82□□□□□ -1.64
CPT1AP50416 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.82□□□□□ -1.64
CPT1AP50416 RPL18AP17-201ENST00000455326 198 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 SNORA84-201ENST00000459229 133 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 APOOP2-201ENST00000461561 539 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AC072039.1-201ENST00000477611 581 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 RAP1BP2-201ENST00000478270 544 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 OR4G11P-201ENST00000492842 939 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AC080014.1-201ENST00000496877 1201 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 KLRA1P-201ENST00000503499 986 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.82□□□□□ -1.64
CPT1AP50416 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.82□□□□□ -1.64
CPT1AP50416 PGBD4P4-201ENST00000509673 613 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.82□□□□□ -1.64
CPT1AP50416 LTV1P1-201ENST00000510683 1237 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 SAP18P1-201ENST00000512058 390 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AC099522.1-202ENST00000514718 367 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 RNA5SP73-201ENST00000516744 108 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.82□□□□□ -1.64
CPT1AP50416 SMARCE1P4-201ENST00000523647 241 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.82□□□□□ -1.64
CPT1AP50416 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.82□□□□□ -1.64
CPT1AP50416 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPT1AP50416 AC084757.1-201ENST00000559987 490 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.82□□□□□ -1.64
CPT1AP50416 ACTR3BP3-201ENST00000565577 979 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.82□□□□□ -1.64
CPT1AP50416 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.82□□□□□ -1.64
CPT1AP50416 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.82□□□□□ -1.64
CPT1AP50416 AL031985.2-201ENST00000600955 480 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AF131215.7-201ENST00000602443 707 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AC146944.4-201ENST00000602697 718 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AC073114.1-201ENST00000612027 490 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.82□□□□□ -1.64
CPT1AP50416 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.82□□□□□ -1.64
CPT1AP50416 AC008443.7-201ENST00000622195 246 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AL445363.3-201ENST00000623080 671 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 PCMTD1P7-201ENST00000634506 357 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CPT1AP50416 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
CPT1AP50416 AC114546.3-201ENST00000623582 1734 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 AL022393.1-201ENST00000625142 1677 ntBASIC4.82□□□□□ -1.64
CPT1AP50416 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CPT1AP50416 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.82□□□□□ -1.64
CPT1AP50416 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CPT1AP50416 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.82□□□□□ -1.64
CPT1AP50416 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPT1AP50416 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPT1AP50416 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CPT1AP50416 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CPT1AP50416 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPT1AP50416 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.81□□□□□ -1.64
CPT1AP50416 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CPT1AP50416 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.81□□□□□ -1.64
CPT1AP50416 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CPT1AP50416 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPT1AP50416 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.81□□□□□ -1.64
CPT1AP50416 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPT1AP50416 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms