Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.18□□□□□ -1.9
CSNK1A1P48729 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.18□□□□□ -1.9
CSNK1A1P48729 AC016065.2-201ENST00000514530 444 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 RN7SKP18-201ENST00000516005 275 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 RNU2-27P-201ENST00000516185 142 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.18□□□□□ -1.9
CSNK1A1P48729 HMGB1P23-201ENST00000518743 568 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.18□□□□□ -1.9
CSNK1A1P48729 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.18□□□□□ -1.9
CSNK1A1P48729 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.18□□□□□ -1.9
CSNK1A1P48729 MIR3690-201ENST00000580266 75 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 AC093227.2-201ENST00000589357 285 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 AC022146.1-201ENST00000595307 847 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 AC007566.2-201ENST00000603642 413 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 OR2BH1P-201ENST00000608850 864 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 AL445493.3-201ENST00000619568 477 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.18□□□□□ -1.9
CSNK1A1P48729 AC119674.1-207ENST00000641355 633 ntBASIC3.18□□□□□ -1.9
CSNK1A1P48729 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1A1P48729 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1A1P48729 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1A1P48729 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1A1P48729 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CSNK1A1P48729 MFSD8-236ENST00000641509 4050 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1A1P48729 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1A1P48729 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1A1P48729 RNA5SP295-201ENST00000362655 121 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 RNA5SP42-201ENST00000364278 115 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 MIR554-201ENST00000384874 96 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 RPL21P17-201ENST00000397467 475 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 ATF1P1-201ENST00000406040 927 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 U3.39-201ENST00000408569 239 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 RPL17P36-201ENST00000420302 549 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 VN1R42P-201ENST00000424651 344 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC005517.2-201ENST00000424673 553 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC007389.2-201ENST00000434630 306 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 RRM2P4-201ENST00000441721 562 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 RPS26P56-201ENST00000444468 240 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC017099.1-201ENST00000448261 1028 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC023598.1-201ENST00000472521 361 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 RNU1-45P-201ENST00000517191 141 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 C1DP5-201ENST00000525775 383 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 MTCYBP41-201ENST00000528913 1123 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AP003168.1-201ENST00000530091 307 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC139103.1-201ENST00000534696 1030 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 CYP2C60P-201ENST00000566088 139 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 MIR4425-201ENST00000580572 84 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC012254.4-201ENST00000588843 273 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC010591.1-201ENST00000603941 649 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 HMGN2P28-201ENST00000606102 262 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 STMN1P1-201ENST00000617809 440 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AL163051.2-201ENST00000618976 735 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC020923.1-201ENST00000624021 917 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CSNK1A1P48729 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CSNK1A1P48729 AC007823.1-201ENST00000569932 1566 ntBASIC3.17□□□□□ -1.9
CSNK1A1P48729 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1A1P48729 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 AC073073.2-201ENST00000609827 2578 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1A1P48729 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 SNORD9-201ENST00000362566 104 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1A1P48729 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1A1P48729 EI24P2-201ENST00000397776 1076 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 RNU4-27P-201ENST00000410889 139 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 SDCBPP2-201ENST00000424643 885 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 AL513175.1-201ENST00000431492 780 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1A1P48729 AC074367.1-201ENST00000438685 1125 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 RPS29P31-201ENST00000446147 164 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms