Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC068714.1-201ENST00000559623 800 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.27□□□□□ -1.89
CXCL12P48061 AGGF1P8-201ENST00000562979 1000 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC010653.1-201ENST00000571108 881 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL12P48061 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.27□□□□□ -1.89
CXCL12P48061 AC083899.3-201ENST00000603413 594 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AL355802.4-201ENST00000607635 548 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC104307.1-201ENST00000616142 196 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AC003001.2-201ENST00000616294 831 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AL359715.5-201ENST00000623431 443 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL12P48061 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL12P48061 AC066616.2-201ENST00000559334 1481 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 AP001486.2-201ENST00000561652 5113 ntBASIC3.27□□□□□ -1.89
CXCL12P48061 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CXCL12P48061 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CXCL12P48061 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL12P48061 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL12P48061 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
CXCL12P48061 AC006504.1-201ENST00000562493 3666 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
CXCL12P48061 SRP72P2-201ENST00000344851 1979 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL12P48061 Z86062.1-201ENST00000406773 777 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.26□□□□□ -1.89
CXCL12P48061 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.26□□□□□ -1.89
CXCL12P48061 RPL21P109-201ENST00000422213 475 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 CR848007.2-201ENST00000424918 787 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 AL138785.1-201ENST00000425821 331 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 MTCO3P21-201ENST00000430791 643 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 YWHAEP5-201ENST00000431545 765 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 MTND4LP7-201ENST00000431728 294 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 AC023512.1-201ENST00000444513 499 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 AC008264.1-201ENST00000447612 367 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL12P48061 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.26□□□□□ -1.89
CXCL12P48061 AC009812.2-201ENST00000517657 457 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 SMARCE1P4-201ENST00000523647 241 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL12P48061 NOP56P3-201ENST00000549457 385 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.26□□□□□ -1.89
CXCL12P48061 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.26□□□□□ -1.89
CXCL12P48061 AC022884.3-201ENST00000579571 248 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.26□□□□□ -1.89
CXCL12P48061 AC015849.2-201ENST00000605738 409 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 AC242628.1-201ENST00000606810 391 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 AC012467.1-201ENST00000607740 256 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 AC107294.1-201ENST00000609524 467 ntBASIC3.26□□□□□ -1.89
CXCL12P48061 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.26□□□□□ -1.89
CXCL12P48061 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL12P48061 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CXCL12P48061 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.26□□□□□ -1.89
CXCL12P48061 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CXCL12P48061 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL12P48061 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL12P48061 AC009501.3-201ENST00000605001 1352 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL12P48061 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL12P48061 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CXCL12P48061 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
CXCL12P48061 MIR449A-201ENST00000362113 91 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 SNORA7.4-201ENST00000384249 137 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.25□□□□□ -1.89
CXCL12P48061 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.25□□□□□ -1.89
CXCL12P48061 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.25□□□□□ -1.89
CXCL12P48061 XKRY2-201ENST00000442362 1093 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.25□□□□□ -1.89
CXCL12P48061 AC008481.1-201ENST00000463278 396 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL12P48061 OR52A4P-202ENST00000481634 799 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL12P48061 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL12P48061 RPL12P22-201ENST00000519073 490 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 AP006245.1-201ENST00000522549 120 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 AC008083.2-201ENST00000546707 476 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.25□□□□□ -1.89
CXCL12P48061 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.25□□□□□ -1.89
CXCL12P48061 AL109741.3-201ENST00000561748 592 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 BNIP3P38-201ENST00000601117 544 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 AL049844.2-201ENST00000604280 628 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 AC010200.2-201ENST00000605098 235 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.25□□□□□ -1.89
CXCL12P48061 uc_338.9-201ENST00000617424 182 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL12P48061 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL12P48061 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL12P48061 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL12P48061 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL12P48061 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL12P48061 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL12P48061 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL12P48061 AC000403.1-201ENST00000613696 3585 ntBASIC3.25□□□□□ -1.89
CXCL12P48061 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CXCL12P48061 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.24□□□□□ -1.89
CXCL12P48061 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CXCL12P48061 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms