Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX11P35716 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX11P35716 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX11P35716 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SOX11P35716 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX11P35716 RNA5SP514-201ENST00000363717 111 ntBASIC6.18□□□□□ -1.42
SOX11P35716 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX11P35716 RNU6-1040P-201ENST00000383974 107 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AL391417.1-201ENST00000404100 426 ntBASIC6.18□□□□□ -1.42
SOX11P35716 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX11P35716 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX11P35716 RNU4-64P-201ENST00000410795 131 ntBASIC6.18□□□□□ -1.42
SOX11P35716 RPL12P34-201ENST00000424532 479 ntBASIC6.18□□□□□ -1.42
SOX11P35716 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.18□□□□□ -1.42
SOX11P35716 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX11P35716 AL645939.3-201ENST00000435408 225 ntBASIC6.18□□□□□ -1.42
SOX11P35716 RPL7P28-201ENST00000437739 740 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX11P35716 TIMM8BP2-201ENST00000445940 251 ntBASIC6.18□□□□□ -1.42
SOX11P35716 HMGB3P21-201ENST00000452483 547 ntBASIC6.18□□□□□ -1.42
SOX11P35716 snoU109.4-201ENST00000458953 143 ntBASIC6.18□□□□□ -1.42
SOX11P35716 MTATP8P1-201ENST00000467115 207 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC004453.1-201ENST00000487895 408 ntBASIC6.18□□□□□ -1.42
SOX11P35716 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX11P35716 AP002812.1-201ENST00000495378 474 ntBASIC6.18□□□□□ -1.42
SOX11P35716 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX11P35716 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC093816.1-201ENST00000515076 913 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC026801.2-201ENST00000515352 425 ntBASIC6.18□□□□□ -1.42
SOX11P35716 HIGD1AP3-201ENST00000515857 278 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC100870.1-201ENST00000522035 505 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX11P35716 AL117187.1-201ENST00000555482 181 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC007956.1-201ENST00000555623 542 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AL121576.1-201ENST00000556055 276 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC008269.2-201ENST00000561915 1105 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC010653.1-201ENST00000571108 881 ntBASIC6.18□□□□□ -1.42
SOX11P35716 MIR4680-201ENST00000580906 66 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC012368.3-201ENST00000604190 219 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC114477.1-201ENST00000605097 605 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AP001264.1-201ENST00000620602 703 ntBASIC6.18□□□□□ -1.42
SOX11P35716 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
SOX11P35716 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX11P35716 DDX10P1-201ENST00000448545 1933 ntBASIC6.18□□□□□ -1.42
SOX11P35716 AC009951.1-201ENST00000623674 2614 ntBASIC6.18□□□□□ -1.42
SOX11P35716 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX11P35716 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX11P35716 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX11P35716 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX11P35716 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX11P35716 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX11P35716 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX11P35716 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX11P35716 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX11P35716 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX11P35716 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX11P35716 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX11P35716 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SOX11P35716 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SOX11P35716 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SOX11P35716 AC026523.2-201ENST00000625039 7739 ntBASIC6.17□□□□□ -1.42
SOX11P35716 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
SOX11P35716 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.17□□□□□ -1.42
SOX11P35716 SNORA75B-201ENST00000384053 137 ntBASIC6.17□□□□□ -1.42
SOX11P35716 RNU6-331P-201ENST00000384724 107 ntBASIC6.17□□□□□ -1.42
SOX11P35716 MIR621-201ENST00000384919 96 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AL360182.1-201ENST00000397433 468 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AL023284.3-201ENST00000407767 334 ntBASIC6.17□□□□□ -1.42
SOX11P35716 RNU4-25P-201ENST00000410569 230 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AC116036.1-201ENST00000412199 367 ntBASIC6.17□□□□□ -1.42
SOX11P35716 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SOX11P35716 HMGB3P24-201ENST00000433260 622 ntBASIC6.17□□□□□ -1.42
SOX11P35716 SNRPEP4-201ENST00000435815 279 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.17□□□□□ -1.42
SOX11P35716 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX11P35716 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.17□□□□□ -1.42
SOX11P35716 AC073109.1-201ENST00000445066 978 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AL162389.1-201ENST00000449233 177 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AC010631.1-201ENST00000474150 156 ntBASIC6.17□□□□□ -1.42
SOX11P35716 VN1R105P-201ENST00000486595 910 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AC008638.1-201ENST00000506035 866 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AC079140.5-201ENST00000507882 310 ntBASIC6.17□□□□□ -1.42
SOX11P35716 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX11P35716 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX11P35716 RN7SKP82-201ENST00000516786 223 ntBASIC6.17□□□□□ -1.42
SOX11P35716 RNU6-685P-201ENST00000517088 95 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX11P35716 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX11P35716 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.17□□□□□ -1.42
SOX11P35716 AC073916.1-201ENST00000545095 130 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AC026956.1-201ENST00000558741 396 ntBASIC6.17□□□□□ -1.42
SOX11P35716 RN7SL270P-201ENST00000579643 281 ntBASIC6.17□□□□□ -1.42
SOX11P35716 MIR3941-201ENST00000582572 103 ntBASIC6.17□□□□□ -1.42
SOX11P35716 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.17□□□□□ -1.42
SOX11P35716 BNIP3P16-201ENST00000589779 534 ntBASIC6.17□□□□□ -1.42
SOX11P35716 MIR7109-201ENST00000613748 65 ntBASIC6.17□□□□□ -1.42
SOX11P35716 AL591926.1-201ENST00000620542 217 ntBASIC6.17□□□□□ -1.42
SOX11P35716 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.17□□□□□ -1.42
SOX11P35716 MIR4496-201ENST00000635896 61 ntBASIC6.17□□□□□ -1.42
SOX11P35716 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms