Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD13P35453 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD13P35453 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.34□□□□□ -1.71
HOXD13P35453 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD13P35453 RAC1P3-201ENST00000416129 580 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 MTND2P16-201ENST00000419987 799 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AC092648.1-201ENST00000425870 423 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AC004975.1-201ENST00000428733 208 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD13P35453 AC091390.1-201ENST00000433904 331 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 KCTD9P3-201ENST00000434597 1169 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD13P35453 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD13P35453 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD13P35453 USP9YP7-201ENST00000436723 430 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 HMGB1P37-201ENST00000439613 609 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD13P35453 USP9YP32-201ENST00000452432 430 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD13P35453 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD13P35453 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.34□□□□□ -1.71
HOXD13P35453 MTCYBP37-201ENST00000510642 1133 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 RNA5SP179-201ENST00000517284 121 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 IGKV2D-36-201ENST00000518643 226 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD13P35453 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD13P35453 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD13P35453 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD13P35453 AL132857.1-201ENST00000555180 708 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AC107954.1-201ENST00000565906 727 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD13P35453 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD13P35453 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXD13P35453 AC091946.2-201ENST00000606105 291 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 RNU4-5P-201ENST00000607255 135 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AC078899.5-201ENST00000612475 178 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AL354976.1-201ENST00000613843 387 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 C2orf27A-204ENST00000623058 969 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AC073530.2-201ENST00000623987 261 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 AC099786.3-201ENST00000565735 1410 ntBASIC4.34□□□□□ -1.71
HOXD13P35453 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD13P35453 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HOXD13P35453 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD13P35453 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXD13P35453 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXD13P35453 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXD13P35453 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
HOXD13P35453 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXD13P35453 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD13P35453 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD13P35453 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD13P35453 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD13P35453 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD13P35453 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HOXD13P35453 GDI2P1-201ENST00000429312 1336 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 RNA5SP167-201ENST00000365461 116 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 AL024474.1-201ENST00000404655 591 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD13P35453 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD13P35453 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD13P35453 AL691449.1-201ENST00000426570 421 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 AL117339.2-201ENST00000430475 180 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 FTH1P6-201ENST00000430768 320 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 MOB1AP1-201ENST00000430903 535 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 RPS6P12-201ENST00000432491 726 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD13P35453 RRM2P4-201ENST00000441721 562 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 AC114755.5-201ENST00000447760 831 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 RPS17P13-201ENST00000448974 407 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD13P35453 RFC5P1-201ENST00000454419 874 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 RPL5P24-201ENST00000463742 885 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD13P35453 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD13P35453 RNU6-1225P-201ENST00000516336 65 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD13P35453 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD13P35453 PARP1P2-201ENST00000556806 195 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD13P35453 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXD13P35453 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD13P35453 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXD13P35453 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD13P35453 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD13P35453 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD13P35453 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXD13P35453 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD13P35453 AC008083.4-201ENST00000615076 444 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 AC090116.1-201ENST00000615679 446 ntBASIC4.33□□□□□ -1.72
HOXD13P35453 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HOXD13P35453 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HOXD13P35453 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD13P35453 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD13P35453 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD13P35453 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HOXD13P35453 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD13P35453 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD13P35453 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms