Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA9P31269 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
HOXA9P31269 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA9P31269 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA9P31269 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA9P31269 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HOXA9P31269 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA9P31269 GSTA12P-201ENST00000402398 508 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 OR4K6P-201ENST00000416478 897 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA9P31269 AL031736.2-201ENST00000426573 787 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 USP9YP31-201ENST00000431405 881 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA9P31269 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HOXA9P31269 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA9P31269 Z75741.1-201ENST00000446793 314 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 HMGN2P21-201ENST00000447764 270 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 RPL5P13-201ENST00000462840 709 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA9P31269 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA9P31269 RN7SL504P-201ENST00000494496 287 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 RPL30P11-201ENST00000495304 339 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXA9P31269 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA9P31269 HSPA8P19-201ENST00000505359 1517 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA9P31269 AC108157.1-201ENST00000510511 539 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA9P31269 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXA9P31269 OR4R3P-201ENST00000525084 838 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 HIGD1AP10-201ENST00000527837 282 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA9P31269 DUXAP6-201ENST00000553858 601 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 Z82195.1-201ENST00000604558 398 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXA9P31269 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXA9P31269 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HOXA9P31269 AC006065.5-201ENST00000623427 349 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 AC127502.3-201ENST00000636170 1206 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA9P31269 AC118273.1-201ENST00000525324 3006 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 TNPO1P3-201ENST00000436471 2662 ntBASIC3.57□□□□□ -1.84
HOXA9P31269 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA9P31269 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA9P31269 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA9P31269 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HOXA9P31269 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA9P31269 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA9P31269 RNA5SP189-201ENST00000364920 115 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXA9P31269 HMGB1P10-201ENST00000395823 563 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AL391417.1-201ENST00000404100 426 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXA9P31269 MTND4P22-201ENST00000413116 1169 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AC004022.2-201ENST00000413824 193 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AC019070.1-201ENST00000415008 1024 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 MTND4P11-201ENST00000417020 1058 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 BTF3P9-201ENST00000418784 283 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA9P31269 ARF4P2-201ENST00000430209 526 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA9P31269 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXA9P31269 AC084357.1-201ENST00000473404 255 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AC090543.1-201ENST00000492168 485 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA9P31269 HMGB1P3-201ENST00000502802 616 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AC112198.1-201ENST00000505369 1220 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AC021146.1-201ENST00000511202 716 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA9P31269 AP006245.1-201ENST00000522549 120 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA9P31269 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA9P31269 AC106782.4-201ENST00000568264 210 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AC125494.3-201ENST00000602759 455 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AC112503.1-201ENST00000608436 391 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA9P31269 AC135507.2-201ENST00000612443 309 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA9P31269 U7.8-201ENST00000619968 63 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AL356490.1-201ENST00000623079 479 ntBASIC3.56□□□□□ -1.84
HOXA9P31269 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXA9P31269 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA9P31269 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXA9P31269 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXA9P31269 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXA9P31269 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HOXA9P31269 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HOXA9P31269 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HOXA9P31269 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXA9P31269 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA9P31269 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HOXA9P31269 AL353743.4-201ENST00000422653 1547 ntBASIC3.55□□□□□ -1.84
HOXA9P31269 CEP170P1-201ENST00000502249 4587 ntBASIC3.55□□□□□ -1.84
HOXA9P31269 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA9P31269 AC138915.3-201ENST00000562908 1389 ntBASIC3.55□□□□□ -1.84
HOXA9P31269 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA9P31269 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms