Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.39□□□□□ -1.39
VARSP26640 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.39□□□□□ -1.39
VARSP26640 AC106782.4-201ENST00000568264 210 ntBASIC6.39□□□□□ -1.39
VARSP26640 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.39□□□□□ -1.39
VARSP26640 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.39□□□□□ -1.39
VARSP26640 AC104687.2-201ENST00000604442 342 ntBASIC6.39□□□□□ -1.39
VARSP26640 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.39□□□□□ -1.39
VARSP26640 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.39□□□□□ -1.39
VARSP26640 MIR6861-201ENST00000618657 64 ntBASIC6.39□□□□□ -1.39
VARSP26640 AL138713.1-201ENST00000624026 2130 ntBASIC6.39□□□□□ -1.39
VARSP26640 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
VARSP26640 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARSP26640 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARSP26640 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARSP26640 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.39□□□□□ -1.39
VARSP26640 AC140134.1-201ENST00000511830 3544 ntBASIC6.39□□□□□ -1.39
VARSP26640 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VARSP26640 CASC19-228ENST00000641414 1684 ntBASIC6.39□□□□□ -1.39
VARSP26640 AC005332.9-201ENST00000620266 2921 ntBASIC6.39□□□□□ -1.39
VARSP26640 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.39□□□□□ -1.39
VARSP26640 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.38□□□□□ -1.39
VARSP26640 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
VARSP26640 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.38□□□□□ -1.39
VARSP26640 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
VARSP26640 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
VARSP26640 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 Y_RNA.214-201ENST00000364201 112 ntBASIC6.38□□□□□ -1.39
VARSP26640 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.38□□□□□ -1.39
VARSP26640 RNU6-128P-201ENST00000383976 107 ntBASIC6.38□□□□□ -1.39
VARSP26640 RNU6-187P-201ENST00000384139 106 ntBASIC6.38□□□□□ -1.39
VARSP26640 RNU6-432P-201ENST00000384196 109 ntBASIC6.38□□□□□ -1.39
VARSP26640 RNU1-46P-201ENST00000384425 164 ntBASIC6.38□□□□□ -1.39
VARSP26640 RNU6-306P-201ENST00000384617 107 ntBASIC6.38□□□□□ -1.39
VARSP26640 AL136372.1-201ENST00000403060 228 ntBASIC6.38□□□□□ -1.39
VARSP26640 MIR1282-201ENST00000408865 101 ntBASIC6.38□□□□□ -1.39
VARSP26640 RNU6-55P-201ENST00000411092 107 ntBASIC6.38□□□□□ -1.39
VARSP26640 HMGN1P24-201ENST00000412282 298 ntBASIC6.38□□□□□ -1.39
VARSP26640 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.38□□□□□ -1.39
VARSP26640 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.38□□□□□ -1.39
VARSP26640 AC245884.2-201ENST00000426257 404 ntBASIC6.38□□□□□ -1.39
VARSP26640 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.38□□□□□ -1.39
VARSP26640 AL133244.1-201ENST00000456007 258 ntBASIC6.38□□□□□ -1.39
VARSP26640 DYNLL1P5-201ENST00000467158 270 ntBASIC6.38□□□□□ -1.39
VARSP26640 AC092824.1-201ENST00000483524 576 ntBASIC6.38□□□□□ -1.39
VARSP26640 AC108860.1-201ENST00000484521 383 ntBASIC6.38□□□□□ -1.39
VARSP26640 AP002812.1-201ENST00000495378 474 ntBASIC6.38□□□□□ -1.39
VARSP26640 RNU6-307P-201ENST00000516743 106 ntBASIC6.38□□□□□ -1.39
VARSP26640 AC116917.1-201ENST00000520558 305 ntBASIC6.38□□□□□ -1.39
VARSP26640 AC100784.1-201ENST00000522790 310 ntBASIC6.38□□□□□ -1.39
VARSP26640 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.38□□□□□ -1.39
VARSP26640 AC022080.3-201ENST00000544433 482 ntBASIC6.38□□□□□ -1.39
VARSP26640 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.38□□□□□ -1.39
VARSP26640 SETP7-201ENST00000552169 453 ntBASIC6.38□□□□□ -1.39
VARSP26640 AP003115.1-201ENST00000569849 463 ntBASIC6.38□□□□□ -1.39
VARSP26640 MIR4675-201ENST00000577898 77 ntBASIC6.38□□□□□ -1.39
VARSP26640 AC011494.1-201ENST00000596454 237 ntBASIC6.38□□□□□ -1.39
VARSP26640 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.38□□□□□ -1.39
VARSP26640 AC091133.5-201ENST00000603088 301 ntBASIC6.38□□□□□ -1.39
VARSP26640 RPL23AP92-201ENST00000603609 255 ntBASIC6.38□□□□□ -1.39
VARSP26640 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.38□□□□□ -1.39
VARSP26640 AC004241.2-201ENST00000614562 444 ntBASIC6.38□□□□□ -1.39
VARSP26640 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.38□□□□□ -1.39
VARSP26640 AC074140.1-201ENST00000621617 208 ntBASIC6.38□□□□□ -1.39
VARSP26640 AC073488.9-201ENST00000631601 754 ntBASIC6.38□□□□□ -1.39
VARSP26640 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.38□□□□□ -1.39
VARSP26640 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.38□□□□□ -1.39
VARSP26640 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.38□□□□□ -1.39
VARSP26640 AC232271.1-201ENST00000602455 2715 ntBASIC6.38□□□□□ -1.39
VARSP26640 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.38□□□□□ -1.39
VARSP26640 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.38□□□□□ -1.39
VARSP26640 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARSP26640 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
VARSP26640 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.38□□□□□ -1.39
VARSP26640 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.37□□□□□ -1.39
VARSP26640 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARSP26640 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VARSP26640 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.37□□□□□ -1.39
VARSP26640 AL606537.1-201ENST00000607258 2011 ntBASIC6.37□□□□□ -1.39
VARSP26640 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VARSP26640 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARSP26640 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
VARSP26640 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.37□□□□□ -1.39
VARSP26640 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARSP26640 Y_RNA.64-201ENST00000362845 102 ntBASIC6.37□□□□□ -1.39
VARSP26640 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.37□□□□□ -1.39
VARSP26640 RNU6-188P-201ENST00000364207 107 ntBASIC6.37□□□□□ -1.39
VARSP26640 Y_RNA.270-201ENST00000364693 104 ntBASIC6.37□□□□□ -1.39
VARSP26640 SNORA70H-201ENST00000383910 135 ntBASIC6.37□□□□□ -1.39
VARSP26640 SNORA70J-201ENST00000384182 135 ntBASIC6.37□□□□□ -1.39
VARSP26640 Y_RNA.478-201ENST00000384358 107 ntBASIC6.37□□□□□ -1.39
VARSP26640 RNU6-1127P-201ENST00000384580 107 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms