Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDH3P22223 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH3P22223 snoZ40.1-201ENST00000364540 72 ntBASIC3.98□□□□□ -1.77
CDH3P22223 RNA5SP515-201ENST00000364570 118 ntBASIC3.98□□□□□ -1.77
CDH3P22223 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH3P22223 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH3P22223 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CDH3P22223 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH3P22223 HNRNPDP2-201ENST00000406475 478 ntBASIC3.98□□□□□ -1.77
CDH3P22223 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH3P22223 HMGB3P5-201ENST00000428894 612 ntBASIC3.98□□□□□ -1.77
CDH3P22223 RPL23AP89-201ENST00000439324 255 ntBASIC3.98□□□□□ -1.77
CDH3P22223 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.98□□□□□ -1.77
CDH3P22223 HMGB1P48-201ENST00000446155 598 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH3P22223 COX6CP18-201ENST00000448769 222 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH3P22223 RPL23AP15-201ENST00000450202 459 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH3P22223 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.98□□□□□ -1.77
CDH3P22223 RPS20P32-201ENST00000456044 356 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AC005410.1-202ENST00000460347 485 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AL672167.3-201ENST00000465951 960 ntBASIC3.98□□□□□ -1.77
CDH3P22223 RN7SL585P-201ENST00000470538 280 ntBASIC3.98□□□□□ -1.77
CDH3P22223 RPS3AP6-201ENST00000484430 795 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH3P22223 PTGES3P3-201ENST00000511479 482 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AC109471.1-201ENST00000511631 612 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH3P22223 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH3P22223 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CDH3P22223 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH3P22223 OR8R1P-201ENST00000543943 764 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AC084824.1-201ENST00000550917 1005 ntBASIC3.98□□□□□ -1.77
CDH3P22223 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH3P22223 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH3P22223 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.98□□□□□ -1.77
CDH3P22223 AL390816.3-201ENST00000604527 1066 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AC024941.1-201ENST00000612250 334 ntBASIC3.98□□□□□ -1.77
CDH3P22223 AL356863.1-201ENST00000623378 1080 ntBASIC3.98□□□□□ -1.77
CDH3P22223 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.98□□□□□ -1.77
CDH3P22223 RNA5SP196-201ENST00000625967 102 ntBASIC3.98□□□□□ -1.77
CDH3P22223 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH3P22223 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.98□□□□□ -1.77
CDH3P22223 MIR4278-201ENST00000636094 69 ntBASIC3.98□□□□□ -1.77
CDH3P22223 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CDH3P22223 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CDH3P22223 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CDH3P22223 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
CDH3P22223 RLIMP1-201ENST00000339626 1680 ntBASIC3.97□□□□□ -1.77
CDH3P22223 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CDH3P22223 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CDH3P22223 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDH3P22223 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH3P22223 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH3P22223 MIR372-201ENST00000362225 67 ntBASIC3.97□□□□□ -1.77
CDH3P22223 MIR513B-201ENST00000385136 84 ntBASIC3.97□□□□□ -1.77
CDH3P22223 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 AL117339.2-201ENST00000430475 180 ntBASIC3.97□□□□□ -1.77
CDH3P22223 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH3P22223 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 TPTE2P3-201ENST00000441562 1189 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AC006011.1-201ENST00000442758 349 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH3P22223 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH3P22223 AC079776.3-201ENST00000450665 370 ntBASIC3.97□□□□□ -1.77
CDH3P22223 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.97□□□□□ -1.77
CDH3P22223 RPL37P6-202ENST00000464216 403 ntBASIC3.97□□□□□ -1.77
CDH3P22223 RPL7P1-201ENST00000468161 747 ntBASIC3.97□□□□□ -1.77
CDH3P22223 RPL7P9-201ENST00000468715 747 ntBASIC3.97□□□□□ -1.77
CDH3P22223 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CDH3P22223 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 RPL29P14-201ENST00000495837 428 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AC078918.1-201ENST00000498515 228 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AC084024.2-201ENST00000503480 791 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AC011352.3-201ENST00000505162 593 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AC005921.1-201ENST00000510589 286 ntBASIC3.97□□□□□ -1.77
CDH3P22223 KRT19P6-201ENST00000510983 209 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AC026402.1-201ENST00000513642 170 ntBASIC3.97□□□□□ -1.77
CDH3P22223 RNU6-202P-201ENST00000515998 96 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH3P22223 EEF1A1P37-201ENST00000522748 715 ntBASIC3.97□□□□□ -1.77
CDH3P22223 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH3P22223 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH3P22223 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH3P22223 AC079171.1-201ENST00000568788 914 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH3P22223 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH3P22223 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH3P22223 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH3P22223 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms