Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 MIR188-201ENST00000385034 86 ntBASIC5.1□□□□□ -1.59
ATF4P18848 RNA5SP474-201ENST00000391234 90 ntBASIC5.1□□□□□ -1.59
ATF4P18848 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.1□□□□□ -1.59
ATF4P18848 RN7SKP91-201ENST00000410852 288 ntBASIC5.1□□□□□ -1.59
ATF4P18848 RNU6-193P-201ENST00000410977 107 ntBASIC5.1□□□□□ -1.59
ATF4P18848 EEF1A1P40-201ENST00000412883 573 ntBASIC5.1□□□□□ -1.59
ATF4P18848 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.1□□□□□ -1.59
ATF4P18848 MTND4P28-201ENST00000426217 387 ntBASIC5.1□□□□□ -1.59
ATF4P18848 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.1□□□□□ -1.59
ATF4P18848 RPL3P11-201ENST00000434028 1146 ntBASIC5.1□□□□□ -1.59
ATF4P18848 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.1□□□□□ -1.59
ATF4P18848 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.1□□□□□ -1.59
ATF4P18848 AC064862.5-201ENST00000440618 334 ntBASIC5.1□□□□□ -1.59
ATF4P18848 SNRPBP1-201ENST00000443634 282 ntBASIC5.1□□□□□ -1.59
ATF4P18848 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
ATF4P18848 ASNSP3-201ENST00000451989 1306 ntBASIC5.1□□□□□ -1.59
ATF4P18848 AC005517.1-201ENST00000452091 489 ntBASIC5.1□□□□□ -1.59
ATF4P18848 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.1□□□□□ -1.59
ATF4P18848 RN7SL350P-201ENST00000492591 299 ntBASIC5.1□□□□□ -1.59
ATF4P18848 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 MTCO1P35-201ENST00000515270 228 ntBASIC5.1□□□□□ -1.59
ATF4P18848 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.1□□□□□ -1.59
ATF4P18848 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.1□□□□□ -1.59
ATF4P18848 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ATF4P18848 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.1□□□□□ -1.59
ATF4P18848 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.1□□□□□ -1.59
ATF4P18848 OR4H12P-201ENST00000556269 907 ntBASIC5.1□□□□□ -1.59
ATF4P18848 HMGN1P26-201ENST00000558737 303 ntBASIC5.1□□□□□ -1.59
ATF4P18848 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.1□□□□□ -1.59
ATF4P18848 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.1□□□□□ -1.59
ATF4P18848 AC006116.10-201ENST00000591836 581 ntBASIC5.1□□□□□ -1.59
ATF4P18848 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.1□□□□□ -1.59
ATF4P18848 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.1□□□□□ -1.59
ATF4P18848 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.1□□□□□ -1.59
ATF4P18848 AL589994.2-201ENST00000621124 579 ntBASIC5.1□□□□□ -1.59
ATF4P18848 AC105235.1-201ENST00000623208 1816 ntBASIC5.1□□□□□ -1.59
ATF4P18848 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.1□□□□□ -1.59
ATF4P18848 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
ATF4P18848 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.09□□□□□ -1.59
ATF4P18848 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATF4P18848 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATF4P18848 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATF4P18848 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATF4P18848 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.09□□□□□ -1.59
ATF4P18848 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
ATF4P18848 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATF4P18848 LINC01613-201ENST00000561476 2780 ntBASIC5.09□□□□□ -1.59
ATF4P18848 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.09□□□□□ -1.59
ATF4P18848 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATF4P18848 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATF4P18848 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ATF4P18848 RNU6-173P-201ENST00000364215 104 ntBASIC5.09□□□□□ -1.59
ATF4P18848 RNA5SP235-201ENST00000365411 114 ntBASIC5.09□□□□□ -1.59
ATF4P18848 RNU6-332P-201ENST00000391193 108 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
ATF4P18848 AL606923.1-201ENST00000406616 190 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.09□□□□□ -1.59
ATF4P18848 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.09□□□□□ -1.59
ATF4P18848 AC015977.1-201ENST00000418887 292 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.09□□□□□ -1.59
ATF4P18848 AL360081.1-201ENST00000428299 555 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AL590128.1-201ENST00000433407 286 ntBASIC5.09□□□□□ -1.59
ATF4P18848 SPRYD7P1-201ENST00000443861 570 ntBASIC5.09□□□□□ -1.59
ATF4P18848 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.09□□□□□ -1.59
ATF4P18848 SNRPFP3-201ENST00000457792 225 ntBASIC5.09□□□□□ -1.59
ATF4P18848 RN7SL393P-201ENST00000463588 296 ntBASIC5.09□□□□□ -1.59
ATF4P18848 RN7SL352P-201ENST00000466002 277 ntBASIC5.09□□□□□ -1.59
ATF4P18848 RN7SL221P-201ENST00000466190 281 ntBASIC5.09□□□□□ -1.59
ATF4P18848 RN7SL390P-201ENST00000470634 284 ntBASIC5.09□□□□□ -1.59
ATF4P18848 RN7SL836P-201ENST00000476140 296 ntBASIC5.09□□□□□ -1.59
ATF4P18848 RN7SL502P-201ENST00000481857 290 ntBASIC5.09□□□□□ -1.59
ATF4P18848 MLLT10P2-201ENST00000506434 249 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.09□□□□□ -1.59
ATF4P18848 MTND3P22-201ENST00000510932 243 ntBASIC5.09□□□□□ -1.59
ATF4P18848 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.09□□□□□ -1.59
ATF4P18848 IGKV2D-38-201ENST00000518423 240 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.09□□□□□ -1.59
ATF4P18848 SNRPCP6-201ENST00000528310 210 ntBASIC5.09□□□□□ -1.59
ATF4P18848 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ATF4P18848 AC106785.4-201ENST00000569492 412 ntBASIC5.09□□□□□ -1.59
ATF4P18848 MIR4703-201ENST00000577728 79 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.09□□□□□ -1.59
ATF4P18848 RPL7AP69-201ENST00000595306 806 ntBASIC5.09□□□□□ -1.59
ATF4P18848 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.09□□□□□ -1.59
ATF4P18848 AC019193.2-201ENST00000610012 634 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AC093913.1-201ENST00000614178 329 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AP001486.3-201ENST00000615334 372 ntBASIC5.09□□□□□ -1.59
ATF4P18848 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.09□□□□□ -1.59
ATF4P18848 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.09□□□□□ -1.59
ATF4P18848 AC007603.3-201ENST00000636915 979 ntBASIC5.09□□□□□ -1.59
ATF4P18848 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ATF4P18848 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
ATF4P18848 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.09□□□□□ -1.6
ATF4P18848 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms