Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC099654.11-201ENST00000638857 294 ntBASIC4.86□□□□□ -1.63
TOP2AP11388 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TOP2AP11388 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TOP2AP11388 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TOP2AP11388 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TOP2AP11388 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TOP2AP11388 AC012020.1-201ENST00000624541 1728 ntBASIC4.85□□□□□ -1.63
TOP2AP11388 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TOP2AP11388 AC046144.1-201ENST00000478559 1853 ntBASIC4.85□□□□□ -1.63
TOP2AP11388 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TOP2AP11388 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TOP2AP11388 FTH1P6-201ENST00000430768 320 ntBASIC4.85□□□□□ -1.63
TOP2AP11388 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.85□□□□□ -1.63
TOP2AP11388 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.85□□□□□ -1.63
TOP2AP11388 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.85□□□□□ -1.63
TOP2AP11388 SNORA64.4-201ENST00000516632 81 ntBASIC4.85□□□□□ -1.63
TOP2AP11388 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.85□□□□□ -1.63
TOP2AP11388 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
TOP2AP11388 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TOP2AP11388 AC107081.3-201ENST00000612715 2034 ntBASIC4.85□□□□□ -1.63
TOP2AP11388 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TOP2AP11388 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
TOP2AP11388 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.85□□□□□ -1.63
TOP2AP11388 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TOP2AP11388 RN7SKP247-201ENST00000411094 308 ntBASIC4.84□□□□□ -1.63
TOP2AP11388 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.84□□□□□ -1.63
TOP2AP11388 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.84□□□□□ -1.63
TOP2AP11388 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.84□□□□□ -1.63
TOP2AP11388 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.84□□□□□ -1.63
TOP2AP11388 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.84□□□□□ -1.63
TOP2AP11388 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.84□□□□□ -1.63
TOP2AP11388 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.84□□□□□ -1.63
TOP2AP11388 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.84□□□□□ -1.63
TOP2AP11388 AL355493.4-201ENST00000618530 292 ntBASIC4.84□□□□□ -1.63
TOP2AP11388 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.84□□□□□ -1.63
TOP2AP11388 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TOP2AP11388 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.83□□□□□ -1.64
TOP2AP11388 RPL31P1-201ENST00000398116 372 ntBASIC4.83□□□□□ -1.64
TOP2AP11388 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.83□□□□□ -1.64
TOP2AP11388 AL591623.2-201ENST00000449978 222 ntBASIC4.83□□□□□ -1.64
TOP2AP11388 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.83□□□□□ -1.64
TOP2AP11388 AC078817.1-201ENST00000492623 435 ntBASIC4.83□□□□□ -1.64
TOP2AP11388 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.83□□□□□ -1.64
TOP2AP11388 AC007424.1-203ENST00000554613 687 ntBASIC4.83□□□□□ -1.64
TOP2AP11388 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.83□□□□□ -1.64
TOP2AP11388 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TOP2AP11388 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TOP2AP11388 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TOP2AP11388 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TOP2AP11388 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
TOP2AP11388 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TOP2AP11388 RNA5SP68-201ENST00000363885 119 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.82□□□□□ -1.64
TOP2AP11388 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.82□□□□□ -1.64
TOP2AP11388 SRIP1-201ENST00000489235 288 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.82□□□□□ -1.64
TOP2AP11388 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.82□□□□□ -1.64
TOP2AP11388 AC112503.1-201ENST00000608436 391 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 AL359757.2-201ENST00000624309 274 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
TOP2AP11388 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
TOP2AP11388 ELF2P3-201ENST00000445099 1506 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
TOP2AP11388 SNORA70B-201ENST00000384210 135 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TOP2AP11388 RNA5SP107-201ENST00000411358 122 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 AC245291.1-201ENST00000419501 328 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 AC112220.1-201ENST00000434628 355 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 AC105402.2-201ENST00000438503 358 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.82□□□□□ -1.64
TOP2AP11388 RNA5SP24-201ENST00000516478 95 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.82□□□□□ -1.64
TOP2AP11388 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TOP2AP11388 RN7SL371P-201ENST00000578099 267 ntBASIC4.82□□□□□ -1.64
TOP2AP11388 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TOP2AP11388 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TOP2AP11388 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
TOP2AP11388 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.81□□□□□ -1.64
TOP2AP11388 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.81□□□□□ -1.64
TOP2AP11388 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TOP2AP11388 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TOP2AP11388 MIR512-1-201ENST00000384913 84 ntBASIC4.81□□□□□ -1.64
TOP2AP11388 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.81□□□□□ -1.64
TOP2AP11388 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.81□□□□□ -1.64
TOP2AP11388 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
TOP2AP11388 PWAR6-201ENST00000552334 4618 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TOP2AP11388 RNU1-35P-201ENST00000362782 153 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 RNA5SP383-201ENST00000362934 120 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 MIR518C-201ENST00000384822 101 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 RNA5SP293-201ENST00000410527 113 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 AC002524.1-201ENST00000411687 547 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.8□□□□□ -1.64
TOP2AP11388 MTCO1P51-201ENST00000427672 1060 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 BX276092.4-201ENST00000452056 248 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 AL590639.1-201ENST00000456484 337 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 RNA5SP320-201ENST00000516263 124 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 RNA5SP148-201ENST00000516527 94 ntBASIC4.8□□□□□ -1.64
TOP2AP11388 AC243972.3-201ENST00000539655 198 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 247.5 ms