Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AP005212.4-201ENST00000614206 710 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 AC019080.5-201ENST00000624891 757 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL1P09341 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CXCL1P09341 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CXCL1P09341 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.46□□□□□ -2.02
CXCL1P09341 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL1P09341 AC022031.1-201ENST00000585985 2593 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL1P09341 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CXCL1P09341 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL1P09341 MIR372-201ENST00000362225 67 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 RNA5SP391-201ENST00000363456 119 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL1P09341 RPL31P1-201ENST00000398116 372 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 RNU2-21P-201ENST00000410368 188 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.45□□□□□ -2.02
CXCL1P09341 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL1P09341 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.45□□□□□ -2.02
CXCL1P09341 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL1P09341 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.45□□□□□ -2.02
CXCL1P09341 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL1P09341 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL1P09341 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL1P09341 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL1P09341 GOT2P5-201ENST00000433995 546 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 VDAC1P3-201ENST00000434069 851 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 HIGD1AP11-201ENST00000438361 280 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 RSL24D1P2-201ENST00000445584 366 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AL590399.6-201ENST00000446396 307 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 RPL37P3-201ENST00000456825 293 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AC096992.1-201ENST00000459808 709 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AC007688.1-201ENST00000475592 759 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 RPS27AP9-201ENST00000477681 438 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL1P09341 HMGN1P11-201ENST00000508668 303 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AC021146.7-201ENST00000509604 775 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 FCF1P8-201ENST00000510322 597 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AC005351.1-201ENST00000511152 786 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.45□□□□□ -2.02
CXCL1P09341 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL1P09341 CDH12P4-201ENST00000517835 295 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 CDH12P3-201ENST00000517935 295 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 CDH12P1-201ENST00000518435 295 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 RAB9BP1-201ENST00000519581 626 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.45□□□□□ -2.02
CXCL1P09341 OR5G4P-201ENST00000525251 760 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.45□□□□□ -2.02
CXCL1P09341 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL1P09341 AGGF1P6-201ENST00000569213 976 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.45□□□□□ -2.02
CXCL1P09341 AC010591.1-201ENST00000603941 649 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 AC090525.3-201ENST00000605601 189 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.45□□□□□ -2.02
CXCL1P09341 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.45□□□□□ -2.02
CXCL1P09341 AL590240.3-201ENST00000621416 943 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 FAM157B-203ENST00000639350 358 ntBASIC2.45□□□□□ -2.02
CXCL1P09341 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL1P09341 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CXCL1P09341 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL1P09341 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.44□□□□□ -2.02
CXCL1P09341 RNA5SP51-201ENST00000364750 119 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 AL355379.1-201ENST00000405542 640 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 RNU6-628P-201ENST00000410675 107 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 RNA5SP229-201ENST00000410809 99 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 RNU2-71P-201ENST00000411395 189 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 RNU2-6P-201ENST00000411404 190 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL1P09341 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL1P09341 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL1P09341 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL1P09341 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL1P09341 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL1P09341 AC073387.1-201ENST00000453261 709 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL1P09341 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.44□□□□□ -2.02
CXCL1P09341 RPL21P8-201ENST00000465083 535 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 RPL7P23-201ENST00000493874 747 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 RPL23AP55-201ENST00000498163 452 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL1P09341 RN7SKP18-201ENST00000516005 275 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 SNORA70.18-201ENST00000516696 98 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 RN7SKP277-201ENST00000516895 283 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 RN7SKP116-201ENST00000516902 319 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL1P09341 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CXCL1P09341 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL1P09341 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL1P09341 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL1P09341 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CXCL1P09341 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL1P09341 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL1P09341 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL1P09341 AC074029.1-201ENST00000552531 1044 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL1P09341 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.44□□□□□ -2.02
CXCL1P09341 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL1P09341 AC010615.3-201ENST00000597319 394 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 AL451086.1-201ENST00000605596 223 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 MIR6875-201ENST00000617506 72 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms