Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AL645939.3-201ENST00000435408 225 ntBASIC5.85□□□□□ -1.47
THBS1P07996 GAPDHP37-201ENST00000442317 968 ntBASIC5.85□□□□□ -1.47
THBS1P07996 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.85□□□□□ -1.47
THBS1P07996 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.85□□□□□ -1.47
THBS1P07996 AL353752.1-201ENST00000454946 260 ntBASIC5.85□□□□□ -1.47
THBS1P07996 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.85□□□□□ -1.47
THBS1P07996 RPL7P5-201ENST00000471472 736 ntBASIC5.85□□□□□ -1.47
THBS1P07996 AC114728.1-201ENST00000488289 483 ntBASIC5.85□□□□□ -1.47
THBS1P07996 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.85□□□□□ -1.47
THBS1P07996 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.85□□□□□ -1.47
THBS1P07996 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
THBS1P07996 SCARNA16.2-201ENST00000516520 172 ntBASIC5.85□□□□□ -1.47
THBS1P07996 SNORA40.14-201ENST00000516543 86 ntBASIC5.85□□□□□ -1.47
THBS1P07996 RNA5SP400-201ENST00000517155 111 ntBASIC5.85□□□□□ -1.47
THBS1P07996 AC007991.1-201ENST00000522680 631 ntBASIC5.85□□□□□ -1.47
THBS1P07996 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.85□□□□□ -1.47
THBS1P07996 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.85□□□□□ -1.47
THBS1P07996 MIR3189-201ENST00000578735 73 ntBASIC5.85□□□□□ -1.47
THBS1P07996 MIR4271-201ENST00000582451 67 ntBASIC5.85□□□□□ -1.47
THBS1P07996 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.85□□□□□ -1.47
THBS1P07996 MIR212-201ENST00000586026 110 ntBASIC5.85□□□□□ -1.47
THBS1P07996 AC115085.1-201ENST00000588924 229 ntBASIC5.85□□□□□ -1.47
THBS1P07996 AC073046.2-201ENST00000604756 527 ntBASIC5.85□□□□□ -1.47
THBS1P07996 AL118522.2-201ENST00000616045 615 ntBASIC5.85□□□□□ -1.47
THBS1P07996 AL591926.1-201ENST00000620542 217 ntBASIC5.85□□□□□ -1.47
THBS1P07996 MIR7159-201ENST00000620587 66 ntBASIC5.85□□□□□ -1.47
THBS1P07996 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.85□□□□□ -1.47
THBS1P07996 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.85□□□□□ -1.47
THBS1P07996 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
THBS1P07996 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
THBS1P07996 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
THBS1P07996 GUCY1B2-204ENST00000531898 1979 ntBASIC5.85□□□□□ -1.47
THBS1P07996 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
THBS1P07996 AC027088.4-201ENST00000611559 1947 ntBASIC5.85□□□□□ -1.47
THBS1P07996 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
THBS1P07996 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
THBS1P07996 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
THBS1P07996 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
THBS1P07996 AL592148.3-201ENST00000608771 2646 ntBASIC5.84□□□□□ -1.47
THBS1P07996 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
THBS1P07996 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.84□□□□□ -1.47
THBS1P07996 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
THBS1P07996 AL136984.1-201ENST00000607611 1893 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AC093775.1-201ENST00000624154 1868 ntBASIC5.84□□□□□ -1.47
THBS1P07996 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 HSPA8P14-201ENST00000552265 1805 ntBASIC5.84□□□□□ -1.47
THBS1P07996 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.84□□□□□ -1.47
THBS1P07996 Y_RNA.270-201ENST00000364693 104 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.84□□□□□ -1.47
THBS1P07996 Y_RNA.518-201ENST00000384552 113 ntBASIC5.84□□□□□ -1.47
THBS1P07996 Y_RNA.526-201ENST00000384572 110 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.84□□□□□ -1.47
THBS1P07996 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
THBS1P07996 AC016027.5-201ENST00000427227 210 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AC022022.1-201ENST00000430304 178 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.84□□□□□ -1.47
THBS1P07996 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.84□□□□□ -1.47
THBS1P07996 HIGD1AP11-201ENST00000438361 280 ntBASIC5.84□□□□□ -1.47
THBS1P07996 RPL21P2-201ENST00000440049 481 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.84□□□□□ -1.47
THBS1P07996 RAC1P7-201ENST00000445367 377 ntBASIC5.84□□□□□ -1.47
THBS1P07996 VPS25P1-201ENST00000455691 508 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AC116533.1-201ENST00000459748 321 ntBASIC5.84□□□□□ -1.47
THBS1P07996 RN7SL643P-201ENST00000471845 291 ntBASIC5.84□□□□□ -1.47
THBS1P07996 RN7SL413P-201ENST00000482700 297 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AC015524.1-201ENST00000491585 472 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AC026979.1-201ENST00000492525 396 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AC093852.1-201ENST00000503587 266 ntBASIC5.84□□□□□ -1.47
THBS1P07996 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.84□□□□□ -1.47
THBS1P07996 PGAM1P13-201ENST00000507497 754 ntBASIC5.84□□□□□ -1.47
THBS1P07996 MTND1P19-201ENST00000511780 315 ntBASIC5.84□□□□□ -1.47
THBS1P07996 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 IGHV4-55-201ENST00000520889 368 ntBASIC5.84□□□□□ -1.47
THBS1P07996 HSPE1P20-201ENST00000538133 289 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AC024224.1-201ENST00000538284 609 ntBASIC5.84□□□□□ -1.47
THBS1P07996 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.84□□□□□ -1.47
THBS1P07996 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.84□□□□□ -1.47
THBS1P07996 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.84□□□□□ -1.47
THBS1P07996 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.84□□□□□ -1.47
THBS1P07996 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.84□□□□□ -1.47
THBS1P07996 MT1CP-201ENST00000567054 174 ntBASIC5.84□□□□□ -1.47
THBS1P07996 MIR548AI-201ENST00000579940 88 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AL390877.1-201ENST00000605704 214 ntBASIC5.84□□□□□ -1.47
THBS1P07996 SNORA74.4-201ENST00000607595 199 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AL589743.6-201ENST00000611025 117 ntBASIC5.84□□□□□ -1.47
THBS1P07996 AC068213.1-201ENST00000625124 226 ntBASIC5.84□□□□□ -1.47
THBS1P07996 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.84□□□□□ -1.47
THBS1P07996 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
THBS1P07996 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.84□□□□□ -1.47
THBS1P07996 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
THBS1P07996 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
THBS1P07996 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms