Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SFTPBP07988 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.56□□□□□ -1.84
SFTPBP07988 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.56□□□□□ -1.84
SFTPBP07988 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.56□□□□□ -1.84
SFTPBP07988 CBX3P5-201ENST00000552017 521 ntBASIC3.56□□□□□ -1.84
SFTPBP07988 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.56□□□□□ -1.84
SFTPBP07988 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SFTPBP07988 TVP23BP1-201ENST00000557500 617 ntBASIC3.56□□□□□ -1.84
SFTPBP07988 AC138915.2-201ENST00000569776 97 ntBASIC3.56□□□□□ -1.84
SFTPBP07988 MIR3160-1-201ENST00000577972 85 ntBASIC3.56□□□□□ -1.84
SFTPBP07988 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.56□□□□□ -1.84
SFTPBP07988 AC124312.4-201ENST00000605533 310 ntBASIC3.56□□□□□ -1.84
SFTPBP07988 AC091946.2-201ENST00000606105 291 ntBASIC3.56□□□□□ -1.84
SFTPBP07988 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
SFTPBP07988 AC008083.4-201ENST00000615076 444 ntBASIC3.56□□□□□ -1.84
SFTPBP07988 AC009318.4-201ENST00000620496 486 ntBASIC3.56□□□□□ -1.84
SFTPBP07988 AC010608.3-201ENST00000625048 527 ntBASIC3.56□□□□□ -1.84
SFTPBP07988 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.56□□□□□ -1.84
SFTPBP07988 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SFTPBP07988 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SFTPBP07988 MTND4P10-201ENST00000446199 1363 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.55□□□□□ -1.84
SFTPBP07988 MIR383-201ENST00000362257 73 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 RNU4-51P-201ENST00000364206 140 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 snoZ40.1-201ENST00000364540 72 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 RNU6-629P-201ENST00000384061 103 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SFTPBP07988 AL121972.1-201ENST00000402023 252 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 MTND4LP20-201ENST00000402379 270 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 SNORA3C-201ENST00000408792 125 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 RN7SKP56-201ENST00000410513 331 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 LUZP4P1-201ENST00000415420 344 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.55□□□□□ -1.84
SFTPBP07988 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.55□□□□□ -1.84
SFTPBP07988 RPL23AP38-201ENST00000423801 469 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 GTF2IP7-202ENST00000436677 309 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.55□□□□□ -1.84
SFTPBP07988 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 TPTE2P3-201ENST00000441562 1189 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 AC114755.5-201ENST00000447760 831 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.55□□□□□ -1.84
SFTPBP07988 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.55□□□□□ -1.84
SFTPBP07988 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.55□□□□□ -1.84
SFTPBP07988 RN7SL691P-201ENST00000494487 301 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 SLC25A15P5-201ENST00000508033 253 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 AC026402.1-201ENST00000513642 170 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 MTCO1P30-201ENST00000515244 580 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 RNU2-58P-201ENST00000516403 183 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.55□□□□□ -1.84
SFTPBP07988 MTCYBP41-201ENST00000528913 1123 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 AC008127.2-201ENST00000549925 1075 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 AL389895.1-201ENST00000554127 252 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.55□□□□□ -1.84
SFTPBP07988 MIR4644-201ENST00000579929 84 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 VN1R79P-201ENST00000593540 513 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 BNIP3P33-201ENST00000598912 569 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 AC073968.1-201ENST00000618594 637 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 AC010975.3-201ENST00000618727 978 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 MIR3653-201ENST00000625572 110 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 AC099654.9-201ENST00000637055 678 ntBASIC3.55□□□□□ -1.84
SFTPBP07988 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SFTPBP07988 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SFTPBP07988 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.55□□□□□ -1.84
SFTPBP07988 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.55□□□□□ -1.84
SFTPBP07988 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SFTPBP07988 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
SFTPBP07988 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.54□□□□□ -1.84
SFTPBP07988 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SFTPBP07988 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.54□□□□□ -1.84
SFTPBP07988 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SFTPBP07988 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SFTPBP07988 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SFTPBP07988 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SFTPBP07988 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.54□□□□□ -1.84
SFTPBP07988 AL121657.1-201ENST00000327215 531 ntBASIC3.54□□□□□ -1.84
SFTPBP07988 RNU6-335P-201ENST00000364563 113 ntBASIC3.54□□□□□ -1.84
SFTPBP07988 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SFTPBP07988 SNORA51.6-201ENST00000384151 125 ntBASIC3.54□□□□□ -1.84
SFTPBP07988 Y_RNA.472-201ENST00000384322 102 ntBASIC3.54□□□□□ -1.84
SFTPBP07988 RNU1-89P-201ENST00000384592 164 ntBASIC3.54□□□□□ -1.84
SFTPBP07988 RNU6-925P-201ENST00000384629 104 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms