Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.43□□□□□ -1.86
APOEP02649 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.43□□□□□ -1.86
APOEP02649 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.43□□□□□ -1.86
APOEP02649 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
APOEP02649 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOEP02649 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.43□□□□□ -1.86
APOEP02649 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
APOEP02649 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
APOEP02649 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APOEP02649 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.42□□□□□ -1.86
APOEP02649 AC006946.1-201ENST00000429106 328 ntBASIC3.42□□□□□ -1.86
APOEP02649 ISCA1P2-201ENST00000438679 421 ntBASIC3.42□□□□□ -1.86
APOEP02649 AL591503.2-201ENST00000442314 1005 ntBASIC3.42□□□□□ -1.86
APOEP02649 AC089999.1-201ENST00000460336 374 ntBASIC3.42□□□□□ -1.86
APOEP02649 RPL37P6-202ENST00000464216 403 ntBASIC3.42□□□□□ -1.86
APOEP02649 AC091153.1-201ENST00000466297 402 ntBASIC3.42□□□□□ -1.86
APOEP02649 AC021678.1-201ENST00000505195 936 ntBASIC3.42□□□□□ -1.86
APOEP02649 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
APOEP02649 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.42□□□□□ -1.86
APOEP02649 RNU6-1308P-201ENST00000516817 103 ntBASIC3.42□□□□□ -1.86
APOEP02649 SEC11B-201ENST00000518383 499 ntBASIC3.42□□□□□ -1.86
APOEP02649 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.42□□□□□ -1.86
APOEP02649 AC104027.1-201ENST00000521887 300 ntBASIC3.42□□□□□ -1.86
APOEP02649 HIGD1AP1-201ENST00000550979 275 ntBASIC3.42□□□□□ -1.86
APOEP02649 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.42□□□□□ -1.86
APOEP02649 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.42□□□□□ -1.86
APOEP02649 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.42□□□□□ -1.86
APOEP02649 BNIP3P22-201ENST00000593399 556 ntBASIC3.42□□□□□ -1.86
APOEP02649 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.42□□□□□ -1.86
APOEP02649 CKS1BP3-201ENST00000600888 237 ntBASIC3.42□□□□□ -1.86
APOEP02649 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.42□□□□□ -1.86
APOEP02649 AC069304.3-201ENST00000603938 1084 ntBASIC3.42□□□□□ -1.86
APOEP02649 AC007179.3-201ENST00000604976 235 ntBASIC3.42□□□□□ -1.86
APOEP02649 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.42□□□□□ -1.86
APOEP02649 CR392039.4-201ENST00000624968 501 ntBASIC3.42□□□□□ -1.86
APOEP02649 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.42□□□□□ -1.86
APOEP02649 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
APOEP02649 AC024341.1-201ENST00000526444 1552 ntBASIC3.42□□□□□ -1.86
APOEP02649 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.42□□□□□ -1.86
APOEP02649 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOEP02649 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
APOEP02649 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOEP02649 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOEP02649 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
APOEP02649 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOEP02649 RNU6-805P-201ENST00000365643 106 ntBASIC3.41□□□□□ -1.86
APOEP02649 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOEP02649 RNA5SP120-201ENST00000410900 112 ntBASIC3.41□□□□□ -1.86
APOEP02649 AC245291.1-201ENST00000419501 328 ntBASIC3.41□□□□□ -1.86
APOEP02649 GTF2IP23-201ENST00000423746 351 ntBASIC3.41□□□□□ -1.86
APOEP02649 BX890604.2-201ENST00000427883 474 ntBASIC3.41□□□□□ -1.86
APOEP02649 DPPA2P1-201ENST00000428060 556 ntBASIC3.41□□□□□ -1.86
APOEP02649 AC005300.1-201ENST00000428401 373 ntBASIC3.41□□□□□ -1.86
APOEP02649 AC006028.1-201ENST00000438379 402 ntBASIC3.41□□□□□ -1.86
APOEP02649 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.41□□□□□ -1.86
APOEP02649 HMGB3P11-201ENST00000440127 604 ntBASIC3.41□□□□□ -1.86
APOEP02649 RPS7P5-201ENST00000441482 581 ntBASIC3.41□□□□□ -1.86
APOEP02649 ATP5C1P1-201ENST00000441945 895 ntBASIC3.41□□□□□ -1.86
APOEP02649 HMGN2P21-201ENST00000447764 270 ntBASIC3.41□□□□□ -1.86
APOEP02649 AC091179.1-201ENST00000461606 579 ntBASIC3.41□□□□□ -1.86
APOEP02649 RN7SL807P-201ENST00000470923 297 ntBASIC3.41□□□□□ -1.86
APOEP02649 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.41□□□□□ -1.86
APOEP02649 SNORA64.4-201ENST00000516632 81 ntBASIC3.41□□□□□ -1.86
APOEP02649 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.41□□□□□ -1.86
APOEP02649 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.41□□□□□ -1.86
APOEP02649 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOEP02649 PTP4A1P6-201ENST00000531034 478 ntBASIC3.41□□□□□ -1.86
APOEP02649 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.41□□□□□ -1.86
APOEP02649 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.41□□□□□ -1.86
APOEP02649 AL031985.2-201ENST00000600955 480 ntBASIC3.41□□□□□ -1.86
APOEP02649 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.41□□□□□ -1.86
APOEP02649 AL354976.1-201ENST00000613843 387 ntBASIC3.41□□□□□ -1.86
APOEP02649 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOEP02649 AC006065.5-201ENST00000623427 349 ntBASIC3.41□□□□□ -1.86
APOEP02649 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.41□□□□□ -1.86
APOEP02649 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.41□□□□□ -1.86
APOEP02649 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
APOEP02649 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOEP02649 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.4□□□□□ -1.86
APOEP02649 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOEP02649 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
APOEP02649 MIR208A-201ENST00000362287 71 ntBASIC3.4□□□□□ -1.87
APOEP02649 RNA5SP295-201ENST00000362655 121 ntBASIC3.4□□□□□ -1.87
APOEP02649 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOEP02649 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
APOEP02649 KRR1P1-201ENST00000419430 803 ntBASIC3.4□□□□□ -1.87
APOEP02649 RPL31P45-201ENST00000419532 356 ntBASIC3.4□□□□□ -1.87
APOEP02649 ETF1P3-201ENST00000430422 1160 ntBASIC3.4□□□□□ -1.87
APOEP02649 OR2B8P-201ENST00000432841 938 ntBASIC3.4□□□□□ -1.87
APOEP02649 AL353705.1-201ENST00000433468 480 ntBASIC3.4□□□□□ -1.87
APOEP02649 AC009969.1-201ENST00000438726 172 ntBASIC3.4□□□□□ -1.87
APOEP02649 AC125238.1-201ENST00000448842 249 ntBASIC3.4□□□□□ -1.87
APOEP02649 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.4□□□□□ -1.87
APOEP02649 BTF3P5-201ENST00000457252 467 ntBASIC3.4□□□□□ -1.87
APOEP02649 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOEP02649 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.4□□□□□ -1.87
APOEP02649 AC108078.3-201ENST00000502633 489 ntBASIC3.4□□□□□ -1.87
APOEP02649 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.4□□□□□ -1.87
APOEP02649 KATNBL1P4-201ENST00000503545 918 ntBASIC3.4□□□□□ -1.87
APOEP02649 AC034244.2-201ENST00000514668 858 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms