Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.93□□□□□ -1.62
CNOT4O95628 AL672138.1-201ENST00000450604 1015 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 RPL12P39-201ENST00000455456 496 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 GLUD1P3-202ENST00000508551 200 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.93□□□□□ -1.62
CNOT4O95628 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNOT4O95628 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 AC137627.1-201ENST00000545761 289 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 HIF1AP1-201ENST00000553642 175 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.93□□□□□ -1.62
CNOT4O95628 AL157394.1-201ENST00000562983 1224 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 FKBP1AP1-201ENST00000594588 318 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 AC012616.1-201ENST00000600294 197 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 CKS1BP3-201ENST00000600888 237 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 AL161729.3-201ENST00000603533 673 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 AL050343.2-201ENST00000607338 280 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 AC093788.1-201ENST00000609356 927 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 AC025574.2-201ENST00000615621 514 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 AC099669.2-201ENST00000616549 437 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.93□□□□□ -1.62
CNOT4O95628 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.93□□□□□ -1.62
CNOT4O95628 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CNOT4O95628 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.93□□□□□ -1.62
CNOT4O95628 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.93□□□□□ -1.62
CNOT4O95628 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNOT4O95628 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.93□□□□□ -1.62
CNOT4O95628 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CNOT4O95628 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNOT4O95628 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.93□□□□□ -1.62
CNOT4O95628 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNOT4O95628 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.93□□□□□ -1.62
CNOT4O95628 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNOT4O95628 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNOT4O95628 AC009951.1-201ENST00000623674 2614 ntBASIC4.93□□□□□ -1.62
CNOT4O95628 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CNOT4O95628 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CNOT4O95628 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CNOT4O95628 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.92□□□□□ -1.62
CNOT4O95628 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CNOT4O95628 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNOT4O95628 Z95331.1-201ENST00000623075 23112 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AC114774.1-201ENST00000507410 1770 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.92□□□□□ -1.62
CNOT4O95628 AL121886.1-201ENST00000358609 435 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 RNU4-79P-201ENST00000362764 141 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 RNA5SP319-201ENST00000362768 119 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 RNU6-251P-201ENST00000363235 104 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 RNU6-1279P-201ENST00000383917 103 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 RNU6-769P-201ENST00000384407 104 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 RNU6-908P-201ENST00000410160 94 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 RNA5SP118-201ENST00000410385 109 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.92□□□□□ -1.62
CNOT4O95628 RAD23BP1-201ENST00000421404 1227 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 RIMKLBP2-201ENST00000424737 654 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.92□□□□□ -1.62
CNOT4O95628 OR52B5P-201ENST00000435337 951 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.92□□□□□ -1.62
CNOT4O95628 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.92□□□□□ -1.62
CNOT4O95628 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.92□□□□□ -1.62
CNOT4O95628 AC132479.1-201ENST00000449160 144 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.92□□□□□ -1.62
CNOT4O95628 MTND1P12-201ENST00000455231 147 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AC011225.1-201ENST00000457751 369 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AC087879.1-201ENST00000474343 374 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.92□□□□□ -1.62
CNOT4O95628 RN7SL826P-201ENST00000479724 288 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 RN7SL547P-201ENST00000490793 290 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AC006390.1-201ENST00000508068 283 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.92□□□□□ -1.62
CNOT4O95628 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.92□□□□□ -1.62
CNOT4O95628 IGLV3-24-201ENST00000517477 197 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.92□□□□□ -1.62
CNOT4O95628 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.92□□□□□ -1.62
CNOT4O95628 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.92□□□□□ -1.62
CNOT4O95628 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.92□□□□□ -1.62
CNOT4O95628 HAUS8P1-201ENST00000549005 542 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.92□□□□□ -1.62
CNOT4O95628 AC107954.1-201ENST00000565906 727 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.92□□□□□ -1.62
CNOT4O95628 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.92□□□□□ -1.62
CNOT4O95628 AP001429.1-201ENST00000602568 530 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AC007621.1-201ENST00000604544 437 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AP000942.4-201ENST00000604811 241 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 AL162730.1-201ENST00000605734 292 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 HSPE1P14-201ENST00000605812 302 ntBASIC4.92□□□□□ -1.62
CNOT4O95628 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.92□□□□□ -1.62
CNOT4O95628 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.92□□□□□ -1.62
CNOT4O95628 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.92□□□□□ -1.62
CNOT4O95628 MIR6837-201ENST00000620884 64 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms