Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 VN1R88P-201ENST00000596787 292 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 BNIP3P38-201ENST00000601117 544 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AL451086.1-201ENST00000605596 223 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 RNVU1-4-201ENST00000612985 164 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CLDN9O95484 AC069209.1-201ENST00000619282 651 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AP003355.3-201ENST00000623465 114 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 PWAR6-201ENST00000552334 4618 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN9O95484 ELL2P4-201ENST00000446870 1376 ntBASIC3.46□□□□□ -1.86
CLDN9O95484 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN9O95484 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN9O95484 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN9O95484 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN9O95484 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN9O95484 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN9O95484 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN9O95484 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN9O95484 RNU6-1151P-201ENST00000384684 107 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 RN7SKP202-201ENST00000410439 330 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.45□□□□□ -1.86
CLDN9O95484 PAICSP7-201ENST00000419829 962 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN9O95484 AC005517.2-201ENST00000424673 553 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 HMGB3P5-201ENST00000428894 612 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN9O95484 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN9O95484 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.45□□□□□ -1.86
CLDN9O95484 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN9O95484 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN9O95484 RPS15AP1-201ENST00000457423 391 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 snoU13.24-201ENST00000458998 104 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.45□□□□□ -1.86
CLDN9O95484 AC023598.1-201ENST00000472521 361 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 CYCSP20-201ENST00000473154 315 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 AC092451.1-201ENST00000480211 153 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 NCOR1P1-202ENST00000486162 291 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 UBE2CP3-201ENST00000502715 450 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN9O95484 MTND3P24-201ENST00000506306 329 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN9O95484 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN9O95484 HMGN1P11-201ENST00000508668 303 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.45□□□□□ -1.86
CLDN9O95484 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN9O95484 AP006245.1-201ENST00000522549 120 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 AC007991.1-201ENST00000522680 631 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.45□□□□□ -1.86
CLDN9O95484 AC007566.2-201ENST00000603642 413 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 AL009028.1-201ENST00000604895 802 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 VN1R9P-201ENST00000614184 867 ntBASIC3.45□□□□□ -1.86
CLDN9O95484 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLDN9O95484 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLDN9O95484 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
CLDN9O95484 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CLDN9O95484 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN9O95484 TNPO1P3-201ENST00000436471 2662 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN9O95484 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN9O95484 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN9O95484 MTCO1P6-201ENST00000481192 1384 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CLDN9O95484 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN9O95484 U8.11-201ENST00000384699 133 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 U8.12-201ENST00000384701 133 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 MIR554-201ENST00000384874 96 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 RNA5SP44-201ENST00000410446 133 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 RNU6-77P-201ENST00000410554 91 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN9O95484 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN9O95484 AC068533.1-201ENST00000418542 415 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 AC008280.1-201ENST00000418851 412 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 AL606495.1-201ENST00000422100 813 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.44□□□□□ -1.86
CLDN9O95484 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN9O95484 AC010881.1-201ENST00000433830 235 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 ARL4AP4-201ENST00000434170 518 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN9O95484 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN9O95484 RPL23AP83-201ENST00000434984 473 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 AL929288.2-201ENST00000446368 407 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 AC005002.1-201ENST00000447458 540 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 NPM1P49-201ENST00000448027 714 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 RPS3AP46-201ENST00000448352 682 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 U8.18-201ENST00000459285 133 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 RN7SL594P-201ENST00000470590 287 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 FCF1P3-201ENST00000496394 590 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLDN9O95484 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN9O95484 RNU6-488P-201ENST00000515918 99 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN9O95484 IGJP1-201ENST00000522682 475 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.44□□□□□ -1.86
CLDN9O95484 AP004242.1-201ENST00000533701 349 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 AC026333.2-201ENST00000542164 106 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 DUXAP6-201ENST00000553858 601 ntBASIC3.44□□□□□ -1.86
CLDN9O95484 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.44□□□□□ -1.86
CLDN9O95484 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.44□□□□□ -1.86
CLDN9O95484 AC010928.3-201ENST00000587712 541 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms