Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.67□□□□□ -1.66
PHGDHO43175 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.67□□□□□ -1.66
PHGDHO43175 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.67□□□□□ -1.66
PHGDHO43175 AC079168.2-201ENST00000453977 416 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 SUMO2P2-201ENST00000456482 255 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 CFTRP1-201ENST00000456646 183 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 RPSAP50-201ENST00000481955 852 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 HMGB1P36-201ENST00000487709 576 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.67□□□□□ -1.66
PHGDHO43175 PGBD4P4-201ENST00000509673 613 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 MTCO3P44-201ENST00000510977 541 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 BTF3P13-201ENST00000513224 490 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AC110775.1-201ENST00000513721 462 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 MTCO2P32-201ENST00000514865 403 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 IGHV3-32-201ENST00000519182 355 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.67□□□□□ -1.66
PHGDHO43175 OR6C73P-201ENST00000546432 358 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
PHGDHO43175 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.67□□□□□ -1.66
PHGDHO43175 AGGF1P4-201ENST00000568249 801 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AC209154.1-201ENST00000582156 337 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.67□□□□□ -1.66
PHGDHO43175 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.67□□□□□ -1.66
PHGDHO43175 AC233280.2-201ENST00000603917 1070 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AC104073.3-201ENST00000610942 955 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 SDR42E1P1-201ENST00000611327 477 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AC008121.2-201ENST00000614647 523 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AL121873.1-201ENST00000616013 524 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHGDHO43175 AC009237.17-201ENST00000618111 748 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AC073968.1-201ENST00000618594 637 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AC009509.4-201ENST00000619202 509 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 AP002799.1-201ENST00000623552 423 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHGDHO43175 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PHGDHO43175 AC097714.1-201ENST00000511272 1647 ntBASIC4.67□□□□□ -1.66
PHGDHO43175 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PHGDHO43175 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.67□□□□□ -1.66
PHGDHO43175 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.67□□□□□ -1.66
PHGDHO43175 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHGDHO43175 AL442639.1-201ENST00000625030 1899 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.66□□□□□ -1.66
PHGDHO43175 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PHGDHO43175 AL359893.1-201ENST00000447628 1580 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.66□□□□□ -1.66
PHGDHO43175 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHGDHO43175 MAPK10-303ENST00000641324 3959 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 IRF5P1-201ENST00000504852 2164 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 OR11H4-201ENST00000315409 1082 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.66□□□□□ -1.66
PHGDHO43175 RNU1-94P-201ENST00000362627 173 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 RNA5SP123-201ENST00000363244 119 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 Y_RNA.359-201ENST00000365498 102 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 SNORA70E-201ENST00000384492 135 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 MTND4LP20-201ENST00000402379 270 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 MIR1250-201ENST00000408098 113 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 AL663109.1-201ENST00000411498 844 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 AC069213.2-201ENST00000420238 366 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 COX6CP17-201ENST00000421389 185 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 RBMY2QP-201ENST00000429799 1147 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.66□□□□□ -1.66
PHGDHO43175 AC096638.2-201ENST00000434965 711 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.66□□□□□ -1.66
PHGDHO43175 RSU1P2-202ENST00000437884 485 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.66□□□□□ -1.66
PHGDHO43175 ATP5C1P1-201ENST00000441945 895 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 CDC27P1-201ENST00000445384 715 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 SSXP1-201ENST00000453640 473 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.66□□□□□ -1.66
PHGDHO43175 HMGB1P15-201ENST00000453854 435 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 RPL5P32-201ENST00000454085 879 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 AURKAPS2-201ENST00000454983 333 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PHGDHO43175 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.66□□□□□ -1.66
PHGDHO43175 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.66□□□□□ -1.66
PHGDHO43175 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.66□□□□□ -1.66
PHGDHO43175 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.66□□□□□ -1.66
PHGDHO43175 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.66□□□□□ -1.66
PHGDHO43175 MTND4LP18-201ENST00000526864 291 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 AP003033.1-201ENST00000527244 415 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 AP002963.1-201ENST00000530590 184 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.66□□□□□ -1.66
PHGDHO43175 CENPUP2-201ENST00000555897 1186 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 HNRNPCP4-201ENST00000571636 900 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 RN7SL176P-201ENST00000580352 264 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 MIR4307-201ENST00000582802 84 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.66□□□□□ -1.66
PHGDHO43175 OR7E18P-201ENST00000592589 702 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 AC022916.3-201ENST00000592961 742 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.66□□□□□ -1.66
PHGDHO43175 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.66□□□□□ -1.66
PHGDHO43175 AC091905.4-201ENST00000623432 202 ntBASIC4.66□□□□□ -1.66
PHGDHO43175 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PHGDHO43175 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PHGDHO43175 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
PHGDHO43175 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHGDHO43175 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHGDHO43175 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms