Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.87□□□□□ -1.47
SOX1O00570 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 PWAR1-201ENST00000624188 2414 ntBASIC5.87□□□□□ -1.47
SOX1O00570 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX1O00570 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX1O00570 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SOX1O00570 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SOX1O00570 AP004607.3-201ENST00000530354 3915 ntBASIC5.86□□□□□ -1.47
SOX1O00570 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SOX1O00570 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX1O00570 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SOX1O00570 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX1O00570 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX1O00570 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX1O00570 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX1O00570 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SOX1O00570 RNU6-343P-201ENST00000364709 104 ntBASIC5.86□□□□□ -1.47
SOX1O00570 RNA5SP455-201ENST00000365190 119 ntBASIC5.86□□□□□ -1.47
SOX1O00570 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX1O00570 RNU6-606P-201ENST00000384721 111 ntBASIC5.86□□□□□ -1.47
SOX1O00570 EIF5P1-201ENST00000400019 1231 ntBASIC5.86□□□□□ -1.47
SOX1O00570 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.86□□□□□ -1.47
SOX1O00570 RPS21P8-201ENST00000413365 247 ntBASIC5.86□□□□□ -1.47
SOX1O00570 AC007283.2-201ENST00000424739 197 ntBASIC5.86□□□□□ -1.47
SOX1O00570 AC006548.1-201ENST00000427470 102 ntBASIC5.86□□□□□ -1.47
SOX1O00570 Z82205.1-201ENST00000428456 297 ntBASIC5.86□□□□□ -1.47
SOX1O00570 RHOT1P3-201ENST00000436571 331 ntBASIC5.86□□□□□ -1.47
SOX1O00570 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX1O00570 AC011005.3-201ENST00000491624 395 ntBASIC5.86□□□□□ -1.47
SOX1O00570 AC083829.1-201ENST00000503756 657 ntBASIC5.86□□□□□ -1.47
SOX1O00570 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX1O00570 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.86□□□□□ -1.47
SOX1O00570 AC105417.1-201ENST00000514691 285 ntBASIC5.86□□□□□ -1.47
SOX1O00570 RNU6-410P-201ENST00000517006 107 ntBASIC5.86□□□□□ -1.47
SOX1O00570 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.86□□□□□ -1.47
SOX1O00570 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX1O00570 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX1O00570 AC126615.2-201ENST00000553003 515 ntBASIC5.86□□□□□ -1.47
SOX1O00570 FRG2DP-202ENST00000566967 323 ntBASIC5.86□□□□□ -1.47
SOX1O00570 LARP7P2-201ENST00000575306 125 ntBASIC5.86□□□□□ -1.47
SOX1O00570 MIR4429-201ENST00000580105 73 ntBASIC5.86□□□□□ -1.47
SOX1O00570 MIR3668-201ENST00000582138 75 ntBASIC5.86□□□□□ -1.47
SOX1O00570 MIR4691-201ENST00000583764 85 ntBASIC5.86□□□□□ -1.47
SOX1O00570 AC009597.2-201ENST00000604659 592 ntBASIC5.86□□□□□ -1.47
SOX1O00570 AC016925.2-201ENST00000605108 242 ntBASIC5.86□□□□□ -1.47
SOX1O00570 AC124303.1-201ENST00000605703 360 ntBASIC5.86□□□□□ -1.47
SOX1O00570 CR381572.1-201ENST00000625098 102 ntBASIC5.86□□□□□ -1.47
SOX1O00570 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX1O00570 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX1O00570 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX1O00570 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX1O00570 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX1O00570 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX1O00570 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX1O00570 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX1O00570 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SOX1O00570 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX1O00570 AC018809.2-201ENST00000602436 3823 ntBASIC5.85□□□□□ -1.47
SOX1O00570 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX1O00570 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
SOX1O00570 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX1O00570 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SOX1O00570 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 LARP1BP1-201ENST00000506036 1359 ntBASIC5.85□□□□□ -1.47
SOX1O00570 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SOX1O00570 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SOX1O00570 ARF4P3-201ENST00000397387 509 ntBASIC5.85□□□□□ -1.47
SOX1O00570 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX1O00570 AC137499.1-201ENST00000427602 88 ntBASIC5.85□□□□□ -1.47
SOX1O00570 GSTM5P1-201ENST00000434751 660 ntBASIC5.85□□□□□ -1.47
SOX1O00570 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX1O00570 AL049734.2-201ENST00000441066 616 ntBASIC5.85□□□□□ -1.47
SOX1O00570 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX1O00570 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.85□□□□□ -1.47
SOX1O00570 SLC25A51P1-201ENST00000468432 871 ntBASIC5.85□□□□□ -1.47
SOX1O00570 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX1O00570 AC021146.2-201ENST00000504736 556 ntBASIC5.85□□□□□ -1.47
SOX1O00570 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX1O00570 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.85□□□□□ -1.47
SOX1O00570 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX1O00570 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX1O00570 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX1O00570 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.85□□□□□ -1.47
SOX1O00570 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX1O00570 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX1O00570 AL356432.3-201ENST00000568952 465 ntBASIC5.85□□□□□ -1.47
SOX1O00570 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX1O00570 AC019322.1-201ENST00000571869 389 ntBASIC5.85□□□□□ -1.47
SOX1O00570 MIR4277-201ENST00000578298 84 ntBASIC5.85□□□□□ -1.47
SOX1O00570 AL353997.4-201ENST00000586196 166 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms