Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RPL21P11-201ENST00000461458 483 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 NDUFA5P9-201ENST00000472609 340 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 AC013828.1-201ENST00000481845 158 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC188H7C350 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC188H7C350 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC188H7C350 SNORA48.10-201ENST00000516965 160 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 RNU4-60P-201ENST00000517239 135 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC188H7C350 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC188H7C350 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC188H7C350 OR10V3P-201ENST00000525712 725 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC188H7C350 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC188H7C350 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC188H7C350 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC188H7C350 AC008127.2-201ENST00000549925 1075 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC188H7C350 GTF2IP8-201ENST00000560687 584 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC188H7C350 AL034351.1-201ENST00000605288 668 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 AL159169.3-201ENST00000608871 561 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC188H7C350 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC188H7C350 AP000346.3-201ENST00000622821 210 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 MIR3653-201ENST00000625572 110 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 MIR7641-1-201ENST00000627518 61 ntBASIC4.01□□□□□ -1.77
CCDC188H7C350 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC188H7C350 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
CCDC188H7C350 API5-210ENST00000534600 1760 ntTSL 5 BASIC4□□□□□ -1.77
CCDC188H7C350 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC188H7C350 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC188H7C350 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4□□□□□ -1.77
CCDC188H7C350 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4□□□□□ -1.77
CCDC188H7C350 EIF5P1-201ENST00000400019 1231 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AL121972.1-201ENST00000402023 252 ntBASIC4□□□□□ -1.77
CCDC188H7C350 RPL23AP26-201ENST00000412728 464 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4□□□□□ -1.77
CCDC188H7C350 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4□□□□□ -1.77
CCDC188H7C350 AC092634.6-201ENST00000418558 192 ntBASIC4□□□□□ -1.77
CCDC188H7C350 Z93242.1-201ENST00000427102 353 ntBASIC4□□□□□ -1.77
CCDC188H7C350 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC188H7C350 MOB1AP1-201ENST00000430903 535 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC241584.1-201ENST00000438469 1241 ntBASIC4□□□□□ -1.77
CCDC188H7C350 MTCO1P48-201ENST00000448024 1096 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4□□□□□ -1.77
CCDC188H7C350 EXOSC3P1-201ENST00000448649 500 ntBASIC4□□□□□ -1.77
CCDC188H7C350 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4□□□□□ -1.77
CCDC188H7C350 HMGB3P30-201ENST00000457863 606 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC011276.1-201ENST00000469688 323 ntBASIC4□□□□□ -1.77
CCDC188H7C350 RN7SL459P-201ENST00000481078 302 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC013356.1-201ENST00000489027 564 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC108941.1-201ENST00000502853 530 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC084024.2-201ENST00000503480 791 ntBASIC4□□□□□ -1.77
CCDC188H7C350 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4□□□□□ -1.77
CCDC188H7C350 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC188H7C350 RNA5SP179-201ENST00000517284 121 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4□□□□□ -1.77
CCDC188H7C350 AC008489.1-201ENST00000524271 483 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4□□□□□ -1.77
CCDC188H7C350 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC188H7C350 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4□□□□□ -1.77
CCDC188H7C350 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4□□□□□ -1.77
CCDC188H7C350 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4□□□□□ -1.77
CCDC188H7C350 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC188H7C350 AC021749.1-201ENST00000604322 607 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC091167.4-201ENST00000605079 184 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4□□□□□ -1.77
CCDC188H7C350 AC024060.1-201ENST00000607052 494 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC010975.3-201ENST00000618727 978 ntBASIC4□□□□□ -1.77
CCDC188H7C350 C2orf27A-204ENST00000623058 969 ntBASIC4□□□□□ -1.77
CCDC188H7C350 AC011944.2-201ENST00000624440 683 ntBASIC4□□□□□ -1.77
CCDC188H7C350 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC188H7C350 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC188H7C350 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC188H7C350 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC188H7C350 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4□□□□□ -1.77
CCDC188H7C350 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC188H7C350 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC188H7C350 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4□□□□□ -1.77
CCDC188H7C350 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC188H7C350 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4□□□□□ -1.77
CCDC188H7C350 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4□□□□□ -1.77
CCDC188H7C350 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC188H7C350 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC188H7C350 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC188H7C350 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC188H7C350 RNA5SP167-201ENST00000365461 116 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC188H7C350 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC188H7C350 SNORD65.1-201ENST00000390889 71 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC188H7C350 AL133384.1-201ENST00000412744 351 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC188H7C350 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC188H7C350 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC188H7C350 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC188H7C350 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC188H7C350 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.99□□□□□ -1.77
CCDC188H7C350 C4BPAP2-201ENST00000428434 478 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms