Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 DUXAP3-201ENST00000603616 594 ntBASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL139286.1-201ENST00000604465 483 ntBASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC092954.1-201ENST00000609121 445 ntBASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL355493.4-201ENST00000618530 292 ntBASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC097520.1-201ENST00000624435 385 ntBASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MIR4278-201ENST00000636094 69 ntBASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 OR5BE1P-202ENST00000641168 1176 ntBASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC107982.1-201ENST00000507171 1300 ntBASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LARP1BP1-201ENST00000506036 1359 ntBASIC3.63□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC010300.1-201ENST00000600671 5134 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC00561-201ENST00000565815 2738 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MIR383-201ENST00000362257 73 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNA5SP509-201ENST00000364577 119 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 BTBD10P2-201ENST00000404779 676 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RPL37P18-201ENST00000411602 243 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC068533.2-201ENST00000411872 306 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MTND2P16-201ENST00000419987 799 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ATP5F1P1-201ENST00000433775 569 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC073143.1-201ENST00000436316 395 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL138878.2-201ENST00000440581 1241 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL645939.1-201ENST00000453429 797 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 NECAP1P2-201ENST00000455668 727 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 snoU13.1-201ENST00000459157 104 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RN7SL93P-201ENST00000463035 293 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC004069.2-201ENST00000505438 1114 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC005798.1-201ENST00000513715 387 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MTCO1P30-201ENST00000515244 580 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RN7SKP277-201ENST00000516895 283 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC087465.1-201ENST00000560574 245 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 OR4K7P-201ENST00000580232 945 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC078899.5-201ENST00000612475 178 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC068722.2-201ENST00000618734 544 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AP000776.1-201ENST00000530032 1663 ntBASIC3.62□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ZNF33CP-201ENST00000432492 2030 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC006504.1-201ENST00000562493 3666 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 OR11H4-201ENST00000315409 1082 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 FAM133CP-201ENST00000332869 704 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNU6-216P-201ENST00000363282 104 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNU1-85P-201ENST00000364127 164 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNU6-1226P-201ENST00000384317 107 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 U3.22-201ENST00000391120 215 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ATP5F1P4-201ENST00000397288 746 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL450338.1-201ENST00000407987 512 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC069218.2-201ENST00000411665 344 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms