Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AP001207.1-201ENST00000524051 481 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 PHBP17-201ENST00000528576 541 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AL137072.1-201ENST00000603444 466 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC012468.1-201ENST00000604888 430 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC010738.1-201ENST00000604970 987 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC023813.4-201ENST00000607580 580 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC072039.2-201ENST00000608883 439 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 HULC.1-201ENST00000612720 240 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AL445363.3-201ENST00000623080 671 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 AC007494.3-201ENST00000624660 743 ntBASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RAI2Q9Y5P3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
RAI2Q9Y5P3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.34□□□□□ -1.72
RAI2Q9Y5P3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RAI2Q9Y5P3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RAI2Q9Y5P3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
RAI2Q9Y5P3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.34□□□□□ -1.72
RAI2Q9Y5P3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AL353743.4-201ENST00000422653 1547 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RNU4-44P-201ENST00000363050 141 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RNU5D-1-201ENST00000363299 116 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RNU6-931P-201ENST00000363850 107 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 Y_RNA.436-201ENST00000384097 102 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RNU6-1200P-201ENST00000384162 107 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 MIR217-201ENST00000384817 110 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 MIR491-201ENST00000384877 84 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RNA5SP36-201ENST00000410197 133 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPL6P29-201ENST00000414863 865 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 LUZP4P1-201ENST00000415420 344 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 Z93242.1-201ENST00000427102 353 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC098826.1-201ENST00000433943 471 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 ISCA1P2-201ENST00000438679 421 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPL7P59-201ENST00000447700 943 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 COX6CP18-201ENST00000448769 222 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPL12P26-201ENST00000452430 487 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPS27AP8-201ENST00000452665 445 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC002553.2-201ENST00000453217 340 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC010307.1-201ENST00000467206 836 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPL7P1-201ENST00000468161 747 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPL7P9-201ENST00000468715 747 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPL23AP2-201ENST00000471227 466 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPL30P6-201ENST00000475925 342 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPL21P6-201ENST00000479171 504 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPS27P23-201ENST00000487608 251 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPL35P6-201ENST00000490024 372 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 OR2A20P-203ENST00000498397 1268 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC008885.2-201ENST00000509506 930 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPS27AP18-201ENST00000515536 459 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 Y_RNA.655-201ENST00000515919 96 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RNA5SP49-201ENST00000516450 115 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC008694.2-201ENST00000517591 306 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC006064.5-201ENST00000541782 248 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC023161.2-201ENST00000551218 780 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC068714.1-201ENST00000559623 800 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 RPL21P12-201ENST00000559810 515 ntBASIC4.33□□□□□ -1.72
RAI2Q9Y5P3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms