Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RAB9AP3-201ENST00000412737 573 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 DPRXP1-201ENST00000426312 460 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 CETN4P-201ENST00000432407 469 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 PPIAP17-201ENST00000438507 471 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC083863.1-201ENST00000438811 231 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 RPL23AP76-201ENST00000441860 458 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 RAB9AP1-201ENST00000449393 573 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 IFNWP4-201ENST00000453148 294 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 RPL21P11-201ENST00000461458 483 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC022034.3-201ENST00000471393 478 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC126121.1-201ENST00000482313 553 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 RPL30P11-201ENST00000495304 339 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC093755.1-201ENST00000512950 1023 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 RNU6-202P-201ENST00000515998 96 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 RNA5SP135-201ENST00000517019 125 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 CYP4A43P-201ENST00000568156 121 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC022662.1-201ENST00000580252 331 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 NF1P5-201ENST00000588287 448 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AP000255.1-201ENST00000610276 676 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC231759.1-201ENST00000616455 597 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AL139089.1-201ENST00000620372 975 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 AC022509.4-201ENST00000621404 572 ntBASIC4.12□□□□□ -1.75
YIPF1Q9Y548 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
YIPF1Q9Y548 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 Z99496.1-201ENST00000469424 1477 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AC074029.4-201ENST00000624796 1859 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 RNU6-582P-201ENST00000362989 107 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 SNORA73.2-201ENST00000364946 201 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 Y_RNA.465-201ENST00000384293 102 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 RNU6-83P-201ENST00000384568 112 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 SNORD116-23-201ENST00000384645 92 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AC069157.1-201ENST00000421749 137 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 RPL7P44-201ENST00000424827 742 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AL031736.2-201ENST00000426573 787 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 HLA-N-201ENST00000437516 135 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 USP9YP22-201ENST00000438971 294 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 RANP8-201ENST00000444720 713 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 HMGB1P48-201ENST00000446155 598 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 RPS26P28-201ENST00000470806 348 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 VPS26AP1-201ENST00000483197 979 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AC034244.1-201ENST00000507687 207 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 FABP5P12-201ENST00000515543 389 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 SCARNA14-201ENST00000516903 136 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 PAICSP4-201ENST00000517543 1253 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 SMARCE1P4-201ENST00000523647 241 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AP001207.1-201ENST00000524051 481 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AC023050.2-201ENST00000544968 387 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 NIFKP6-201ENST00000598115 845 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AP003392.5-201ENST00000607857 415 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AC026368.1-201ENST00000614934 690 ntBASIC4.11□□□□□ -1.75
YIPF1Q9Y548 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
YIPF1Q9Y548 AC019226.2-201ENST00000625973 424 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms