Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 FAM35DP-201ENST00000323387 2712 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 RNU6-213P-201ENST00000384051 104 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 RNU6-441P-201ENST00000384545 106 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 SSXP10-201ENST00000402595 565 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 GSTA8P-201ENST00000404253 637 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 RSL24D1P1-201ENST00000404972 493 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 MTCO3P31-201ENST00000405526 789 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AL355379.1-201ENST00000405542 640 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 MIR1183-201ENST00000408856 89 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 MTND4P22-201ENST00000413116 1169 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC009237.2-201ENST00000421358 284 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 RPL36P19-201ENST00000430744 301 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 EXTL2P1-201ENST00000446218 416 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 HMGN2P21-201ENST00000447764 270 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 GAPDHP39-201ENST00000481866 979 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC020593.1-201ENST00000507399 299 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC008837.1-201ENST00000511513 412 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 SNORA19.3-201ENST00000516165 130 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 MIR2114-201ENST00000516645 80 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 RNA5SP135-201ENST00000517019 125 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 ARL2BPP5-201ENST00000523141 481 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 OR4R3P-201ENST00000525084 838 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC118942.1-201ENST00000529674 1035 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 BNIP3P39-201ENST00000601077 554 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC015726.1-201ENST00000602353 681 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC018754.1-201ENST00000607486 925 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC093673.2-201ENST00000609674 331 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 VN1R7P-201ENST00000619242 903 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC109454.4-201ENST00000623411 649 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 BDP1P-201ENST00000582658 1990 ntBASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4BQ9Y4P1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC025750.1-201ENST00000399891 379 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 EIF5P1-201ENST00000400019 1231 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC073264.1-201ENST00000411508 416 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC027644.1-201ENST00000419595 298 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 MTCYBP24-201ENST00000420387 1106 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 RPL7P2-201ENST00000427639 268 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 CKS1BP5-201ENST00000434172 273 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 Z74696.2-201ENST00000436514 498 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 RPS29P7-201ENST00000439662 171 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 HMGB1P16-201ENST00000447155 540 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC069499.1-201ENST00000489433 509 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC011352.3-201ENST00000505162 593 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC109471.1-201ENST00000511631 612 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC023141.12-201ENST00000512399 199 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 snoZ278.1-201ENST00000517059 112 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC087897.1-201ENST00000550134 156 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC141257.3-201ENST00000572906 215 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms