Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 RNU6-146P-201ENST00000384602 108 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 SNORD65.1-201ENST00000390889 71 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 ATP5F1P3-201ENST00000397213 657 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 MIR1302-8-201ENST00000408342 128 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 RNU6-603P-201ENST00000411403 107 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 RNU2-6P-201ENST00000411404 190 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 TRGV6-201ENST00000417928 299 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC006960.1-201ENST00000419980 153 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 IPMKP1-201ENST00000425988 855 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC011742.1-201ENST00000431448 434 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 ELOCP18-201ENST00000434209 337 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 RPS29P7-201ENST00000439662 171 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 COX6CP18-201ENST00000448769 222 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 IFNWP4-201ENST00000453148 294 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 RPL7P24-201ENST00000493052 752 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 DYNLL1P6-201ENST00000503440 264 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC021146.8-201ENST00000507455 733 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 IGKV2-36-201ENST00000519999 223 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC090819.1-201ENST00000523800 1111 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 GNRHR2P1-201ENST00000555315 631 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC106785.1-201ENST00000565935 262 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC069545.1-201ENST00000605671 358 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC068137.4-201ENST00000638485 296 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AC114546.3-201ENST00000623582 1734 ntBASIC4.23□□□□□ -1.73
SIX4Q9UIU6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SIX4Q9UIU6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 RNU6-560P-201ENST00000364007 108 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 SNORD116-1-201ENST00000384335 95 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 RPS24P12-201ENST00000402084 394 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 GSTA8P-201ENST00000404253 637 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 RNU6-757P-201ENST00000410334 100 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 RPL7AP73-201ENST00000413490 353 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 Z97055.1-201ENST00000419730 712 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 PAICSP7-201ENST00000419829 962 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 RPS24P8-201ENST00000431490 402 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AL031663.1-201ENST00000437445 219 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AL445567.1-201ENST00000439121 144 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 HMGB1P37-201ENST00000439613 609 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC069285.2-201ENST00000440210 275 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 MTND5P2-201ENST00000442927 1142 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 RANP8-201ENST00000444720 713 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 RPL21P134-201ENST00000453468 483 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AL133477.1-201ENST00000457472 514 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 OR9M1P-201ENST00000459641 921 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC015724.1-201ENST00000478577 156 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 PPIAP15-201ENST00000479662 484 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC126121.1-201ENST00000482313 553 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC116353.3-201ENST00000511215 249 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 BNIP3P5-201ENST00000562290 498 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 BPTFP1-201ENST00000579209 492 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC090312.2-201ENST00000582687 378 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC110760.3-201ENST00000598794 467 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AL392048.1-201ENST00000613946 534 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC018926.3-201ENST00000618841 406 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 FP236240.3-201ENST00000623061 327 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SIX4Q9UIU6 AC025263.3-201ENST00000622965 1396 ntBASIC4.22□□□□□ -1.73
SIX4Q9UIU6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms