Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 FABP5P12-201ENST00000515543 389 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 IGKV2D-19-201ENST00000523346 262 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC010735.1-201ENST00000567305 1026 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC113194.1-201ENST00000606037 500 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 SNORD39.4-201ENST00000620099 78 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AL356321.1-201ENST00000621360 228 ntBASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TREX1Q9NSU2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC005183.1-201ENST00000603687 1979 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 RNU1-70P-201ENST00000362618 164 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 SNORA51.2-201ENST00000364595 132 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 MIR218-2-201ENST00000385006 110 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 MIR134-201ENST00000385258 73 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC012065.2-201ENST00000421295 375 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 CKS1BP5-201ENST00000434172 273 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC122718.1-201ENST00000439448 744 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 HMGB3P11-201ENST00000440127 604 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 HMGB3P8-201ENST00000449709 577 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC104687.1-201ENST00000485829 412 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC093663.1-201ENST00000497190 394 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC023632.4-201ENST00000517783 191 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC022784.5-201ENST00000522241 437 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC004024.1-201ENST00000549244 247 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 POLR2KP1-201ENST00000553226 168 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AL121594.4-201ENST00000556211 1196 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AL109618.2-201ENST00000605527 211 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC092184.1-201ENST00000625042 715 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 AC073476.4-201ENST00000628409 72 ntBASIC3.34□□□□□ -1.87
TREX1Q9NSU2 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TREX1Q9NSU2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TREX1Q9NSU2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TREX1Q9NSU2 RIOK3P1-201ENST00000418778 1528 ntBASIC3.34□□□□□ -1.88
TREX1Q9NSU2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
TREX1Q9NSU2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 MIR142-201ENST00000384835 87 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 EI24P2-201ENST00000397776 1076 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 Z86062.1-201ENST00000406773 777 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 RPL31P12-201ENST00000422587 358 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC241520.1-201ENST00000422654 1099 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 FAR1P1-201ENST00000427163 934 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 FO393419.3-201ENST00000428741 282 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 ISCA1P2-201ENST00000438679 421 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AL662791.1-201ENST00000441992 928 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 RPL23AP33-201ENST00000442301 452 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 RPL26P28-201ENST00000451325 435 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 RPL21P104-201ENST00000464143 478 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 RPS4XP22-201ENST00000480755 780 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC025459.1-201ENST00000504072 156 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC104027.1-201ENST00000521887 300 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms