Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RTN4Q9NQC3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 Y_RNA.216-201ENST00000364205 93 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 RNU6-310P-201ENST00000384655 107 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AC063979.1-201ENST00000415539 377 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 RPL24P2-201ENST00000421023 475 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 BX284632.2-201ENST00000421091 399 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 MTND6P12-201ENST00000428247 522 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AL359955.2-201ENST00000445380 353 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AC234771.2-201ENST00000445718 597 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AL591379.2-201ENST00000450223 397 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 MRPS31P2-201ENST00000451581 518 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 snoU13.24-201ENST00000458998 104 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 RN7SL72P-201ENST00000460697 269 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 RN7SL414P-201ENST00000469545 294 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 RPS4XP23-201ENST00000487801 237 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 H3F3AP3-201ENST00000497682 407 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AC120036.3-201ENST00000517826 292 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 IGKV2-19-201ENST00000518132 283 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 RPL10P18-201ENST00000519384 309 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 AC008121.3-201ENST00000618726 433 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 MIR6732-201ENST00000619365 60 ntBASIC8.04□□□□□ -1.12
RTN4Q9NQC3 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
RTN4Q9NQC3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 AC062022.1-201ENST00000451026 1684 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 RNU6-395P-201ENST00000365662 106 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 RNU6-629P-201ENST00000384061 103 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 IGLC6-201ENST00000410078 317 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 RN7SKP86-201ENST00000410454 332 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 RNU6-1304P-201ENST00000411374 106 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 RPL31P12-201ENST00000422587 358 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 RPL7L1P9-201ENST00000431298 745 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 AC091180.1-201ENST00000462104 372 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 AC084198.1-201ENST00000477747 402 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 AC114300.1-201ENST00000502347 280 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 TOMM22P4-201ENST00000511318 336 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 EIF3KP1-201ENST00000513279 656 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 AC063950.1-201ENST00000552036 308 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 MIR1273C-201ENST00000578669 77 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 AC006272.2-201ENST00000594725 163 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 AL078596.1-201ENST00000624856 447 ntBASIC8.03□□□□□ -1.12
RTN4Q9NQC3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RTN4Q9NQC3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
RTN4Q9NQC3 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
RTN4Q9NQC3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC8.02□□□□□ -1.12
RTN4Q9NQC3 ZNF285B-201ENST00000561698 1767 ntBASIC8.02□□□□□ -1.13
RTN4Q9NQC3 AC007823.1-201ENST00000569932 1566 ntBASIC8.02□□□□□ -1.13
RTN4Q9NQC3 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
RTN4Q9NQC3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
RTN4Q9NQC3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RTN4Q9NQC3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RTN4Q9NQC3 AL049641.1-201ENST00000441055 1948 ntBASIC8.02□□□□□ -1.13
RTN4Q9NQC3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.02□□□□□ -1.13
RTN4Q9NQC3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.02□□□□□ -1.13
RTN4Q9NQC3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC8.02□□□□□ -1.13
RTN4Q9NQC3 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms