Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC006512.1-201ENST00000468816 291 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 RN7SL362P-201ENST00000494228 267 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 HMGN1P9-201ENST00000515212 298 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC138517.1-201ENST00000515724 568 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 Y_RNA.665-201ENST00000516177 98 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 RNU6-347P-201ENST00000516658 105 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 HMGN2P36-201ENST00000529541 409 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 OR5BN1P-201ENST00000532955 829 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 RN7SL657P-201ENST00000582431 293 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC245014.3-201ENST00000618589 347 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 AC009318.4-201ENST00000620496 486 ntBASIC5.52□□□□□ -1.53
SSU72Q9NP77 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SSU72Q9NP77 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSU72Q9NP77 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSU72Q9NP77 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSU72Q9NP77 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSU72Q9NP77 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSU72Q9NP77 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSU72Q9NP77 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSU72Q9NP77 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSU72Q9NP77 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC073343.1-201ENST00000328239 651 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 Y_RNA.395-201ENST00000383945 109 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 DSTNP4-201ENST00000399472 474 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 AL356421.1-201ENST00000403255 413 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 RPSAP35-201ENST00000413753 818 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 CHEK2P3-201ENST00000416118 248 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC012065.2-201ENST00000421295 375 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 RPL32P33-201ENST00000487023 394 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 RPS4XP14-201ENST00000493072 781 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC004062.1-201ENST00000509926 645 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 FAM206BP-201ENST00000510179 541 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSU72Q9NP77 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 SNORA25.17-201ENST00000517184 124 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 WBP1LP3-201ENST00000523033 208 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 MT1CP-201ENST00000567054 174 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 MIR6793-201ENST00000612376 63 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC084781.2-201ENST00000615568 161 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 AL713922.2-201ENST00000619384 716 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 AL359757.2-201ENST00000624309 274 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 CR392039.4-201ENST00000624968 501 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 AC073869.8-201ENST00000641806 335 ntBASIC5.51□□□□□ -1.53
SSU72Q9NP77 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSU72Q9NP77 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSU72Q9NP77 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.51□□□□□ -1.53
SSU72Q9NP77 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 OR5P1P-201ENST00000299512 925 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.5□□□□□ -1.53
SSU72Q9NP77 Y_RNA.31-201ENST00000362574 102 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 Y_RNA.367-201ENST00000365544 101 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSU72Q9NP77 RNU6-38P-201ENST00000384085 107 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 SNORA51.9-201ENST00000384295 124 ntBASIC5.5□□□□□ -1.53
SSU72Q9NP77 RNU6-1105P-201ENST00000384774 107 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms