Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 IQCB2P-201ENST00000401788 1633 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AL353743.4-201ENST00000422653 1547 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC007529.1-201ENST00000418574 2178 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC116667.1-201ENST00000604855 2072 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 BDP1P-201ENST00000582658 1990 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 RNA5SP239-201ENST00000410218 129 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 RNU2-42P-201ENST00000410697 113 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AL139421.1-201ENST00000423010 169 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC234781.2-201ENST00000426370 994 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 TXNL1P1-201ENST00000429528 554 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AL365396.1-201ENST00000430854 671 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC006011.1-201ENST00000442758 349 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 Z99714.1-201ENST00000450463 807 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 RN7SL271P-201ENST00000487601 295 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 RPL29P14-201ENST00000495837 428 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 RPS27AP13-201ENST00000498403 237 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 RN7SKP122-201ENST00000515923 296 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 SNORA31.9-201ENST00000516429 84 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 MTCO1P47-201ENST00000523889 1271 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 DUXAP1-201ENST00000556632 463 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AL132657.2-201ENST00000564417 358 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC022968.1-201ENST00000567372 442 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC012417.1-201ENST00000582307 1039 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 MIR4512-201ENST00000583257 77 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC006539.2-201ENST00000601729 572 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC091488.1-201ENST00000604239 660 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC131235.4-201ENST00000609288 620 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AL360219.1-201ENST00000610230 366 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC006338.2-201ENST00000616864 791 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC069209.1-201ENST00000619282 651 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC116618.1-201ENST00000634617 774 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 AC068620.4-201ENST00000636730 1182 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 Z82217.1-201ENST00000625157 8149 ntBASIC4.2□□□□□ -1.74
PCDH9Q9HC56 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDH9Q9HC56 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AC016716.1-201ENST00000265882 708 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 RNU6-619P-201ENST00000365146 108 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 MIR217-201ENST00000384817 110 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 ATP5F1P3-201ENST00000397213 657 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AL133264.1-201ENST00000407157 562 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 RNA5SP80-201ENST00000410475 111 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 USP9YP26-201ENST00000421008 661 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 COX6CP17-201ENST00000421389 185 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AC234779.1-201ENST00000425910 285 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 Z93242.1-201ENST00000427102 353 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 NPM1P24-201ENST00000428039 894 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 USP9YP31-201ENST00000431405 881 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AC087650.1-201ENST00000431445 468 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 RPS26P40-201ENST00000435209 294 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AC006511.1-201ENST00000470614 315 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 RPL7L1P13-201ENST00000511702 739 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 RNU6-1129P-201ENST00000515964 104 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 RNU6-885P-201ENST00000516607 104 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 MRPL49P2-201ENST00000521066 465 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AC087373.1-201ENST00000524920 491 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 GTF2IP8-201ENST00000560687 584 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 MIR5684-201ENST00000585074 65 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AL451044.1-201ENST00000604867 238 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 VIS1.1-201ENST00000610517 203 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AC083809.1-201ENST00000615051 472 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 MIR7151-201ENST00000617477 60 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms