Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC021146.5-201ENST00000503544 545 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 RNU6-1028P-201ENST00000517164 93 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 MRPS36P3-201ENST00000519284 130 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AP006245.1-201ENST00000522549 120 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AP001636.2-201ENST00000525517 696 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 DUXAP6-201ENST00000553858 601 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 MIR3939-201ENST00000582614 106 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 KPNA2P3-201ENST00000584190 848 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 GAS5-AS1-201ENST00000602767 694 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC023043.4-201ENST00000612081 449 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC073569.3-201ENST00000619055 682 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AC139713.2-210ENST00000641741 992 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPF2Q9HAU5 MTCO1P18-201ENST00000455518 1419 ntBASIC4.38□□□□□ -1.71
UPF2Q9HAU5 MFSD8-236ENST00000641509 4050 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 MIR30E-201ENST00000362104 92 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AP002088.1-201ENST00000382740 395 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 MIR141-201ENST00000384975 95 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 MIR513B-201ENST00000385136 84 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 MTND4P22-201ENST00000413116 1169 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AL513174.1-201ENST00000423182 629 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AL035246.1-201ENST00000433554 1255 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 GTF2IP3-201ENST00000433887 494 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 TXNP1-201ENST00000441872 371 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AL357552.1-201ENST00000445254 415 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 SEPT14P24-201ENST00000447236 180 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 OR51B8P-201ENST00000449892 769 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 RPS4XP6-201ENST00000477670 797 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 RN7SL323P-201ENST00000494712 295 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 PRELID3BP5-201ENST00000508612 460 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AC110768.1-201ENST00000509222 400 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 CYCSP30-201ENST00000546447 172 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 VN1R87P-201ENST00000596706 487 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AP002906.1-201ENST00000603405 233 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 MLECP1-201ENST00000615893 709 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AC009318.3-201ENST00000616916 503 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 AP000676.4-201ENST00000624659 623 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 MIR492-201ENST00000638676 116 ntBASIC4.37□□□□□ -1.71
UPF2Q9HAU5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPF2Q9HAU5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 SOD2P1-201ENST00000396543 562 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 RPL31P52-201ENST00000407532 367 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 COX6CP17-201ENST00000421389 185 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 FO393419.3-201ENST00000428741 282 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 RPL34P26-201ENST00000445636 354 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 RPL23AP67-201ENST00000465341 474 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AC006511.1-201ENST00000470614 315 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AC023598.1-201ENST00000472521 361 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AC020898.1-201ENST00000474167 787 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AP000563.1-201ENST00000490865 758 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 RPL7P47-201ENST00000497299 556 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AC093534.1-201ENST00000504977 132 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 FTH1P9-201ENST00000513251 355 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 SNORA70.19-201ENST00000516717 90 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 PDCL2P2-201ENST00000533651 189 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AC023538.1-201ENST00000534576 736 ntBASIC4.36□□□□□ -1.71
UPF2Q9HAU5 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF2Q9HAU5 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms