Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 RNY4P24-201ENST00000362735 96 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 Y_RNA.248-201ENST00000364501 109 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 RNU1-106P-201ENST00000384382 164 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 U8.14-201ENST00000390843 143 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 DSTNP4-201ENST00000399472 474 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 HMGB1P17-201ENST00000403495 628 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 RNU6-248P-201ENST00000410720 107 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AL133384.1-201ENST00000412744 351 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 Z97055.1-201ENST00000419730 712 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 DDX39BP1-205ENST00000422507 192 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 MTND3P21-201ENST00000433774 331 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AL022238.1-201ENST00000442557 355 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 KNOP1P3-201ENST00000446933 426 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC098824.1-201ENST00000453565 980 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC097484.1-201ENST00000471148 389 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC022878.1-201ENST00000530684 149 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 CYCSP28-201ENST00000534284 321 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC087477.6-201ENST00000559595 843 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC137800.2-201ENST00000574375 120 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AP001180.3-201ENST00000582221 145 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 MIR544B-201ENST00000582372 78 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 MIR4480-201ENST00000582492 71 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 RN7SL52P-201ENST00000584271 284 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC105254.2-201ENST00000603636 436 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC098614.4-201ENST00000607601 462 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 AC133644.2-201ENST00000608142 540 ntBASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
AMBRA1Q9C0C7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC107068.1-201ENST00000563286 4218 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC117529.2-201ENST00000512159 2068 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 RN7SKP226-201ENST00000364912 300 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 RNU6-921P-201ENST00000384361 107 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 MIR649-201ENST00000384843 97 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 U3.35-201ENST00000408405 208 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 RN7SKP126-201ENST00000411143 300 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AL596276.1-201ENST00000434465 418 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 UBE2V1P8-201ENST00000437166 265 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC092013.1-201ENST00000438795 332 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 RBMX2P4-201ENST00000441256 376 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 RPL23AP16-201ENST00000441715 421 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 GDI2P2-201ENST00000445131 608 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 RNU7-136P-201ENST00000458819 69 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AP000893.1-201ENST00000474462 794 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 MTND6P6-201ENST00000478031 263 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC106872.3-201ENST00000495104 446 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 AC105252.1-201ENST00000503089 286 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 NDUFB4P2-201ENST00000509515 391 ntBASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.55□□□□□ -1.68
AMBRA1Q9C0C7 MTND4LP18-201ENST00000526864 291 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms