Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 RNA5SP446-201ENST00000515955 82 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 RNU1-45P-201ENST00000517191 141 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC239860.2-201ENST00000525886 270 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 OR4A45P-201ENST00000529954 901 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 DYNLL1P4-201ENST00000549314 266 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC090312.1-201ENST00000580637 348 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AP000811.1-201ENST00000603803 651 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 COX6CP4-201ENST00000605798 228 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC004223.4-201ENST00000612426 332 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AL139418.1-201ENST00000613613 177 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC122133.1-201ENST00000613964 233 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AL607023.1-201ENST00000620045 248 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 MIR4496-201ENST00000635896 61 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC012321.1-201ENST00000561622 1588 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AL161912.2-201ENST00000565707 3007 ntBASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.29□□□□□ -1.56
RTFDC1Q9BY42 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AC087359.1-201ENST00000508335 1740 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 NOL8P1-201ENST00000508336 3529 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 RNU6-1226P-201ENST00000384317 107 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 RNA5SP36-201ENST00000410197 133 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 RN7SKP182-201ENST00000410772 298 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 MTCYBP38-201ENST00000417160 1123 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AL390023.1-201ENST00000428836 262 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 RPL7L1P8-201ENST00000469911 741 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 RPL30P6-201ENST00000475925 342 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 FTH1P21-201ENST00000512179 511 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 NPM1P41-201ENST00000512920 831 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 IFITM8P-201ENST00000522529 394 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AC007954.1-201ENST00000554198 494 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AL161713.1-201ENST00000555538 145 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AL354976.1-201ENST00000613843 387 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AC004943.3-201ENST00000624116 600 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AL445523.1-201ENST00000451184 1362 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 AP000526.1-201ENST00000603308 1388 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 DDX43P2-201ENST00000604753 1354 ntBASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.28□□□□□ -1.56
RTFDC1Q9BY42 NXPH1-205ENST00000602349 1953 ntBASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 RNA5SP175-201ENST00000364275 119 ntBASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 SNORA62.3-201ENST00000365110 153 ntBASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 RNU1-63P-201ENST00000383902 164 ntBASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 AL024474.1-201ENST00000404655 591 ntBASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 RPL21P65-201ENST00000406094 466 ntBASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 AL450338.1-201ENST00000407987 512 ntBASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 AC011233.1-201ENST00000422812 283 ntBASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 OR8F1P-201ENST00000425243 930 ntBASIC5.27□□□□□ -1.57
RTFDC1Q9BY42 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms