Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC009597.2-201ENST00000604659 592 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC087588.2-201ENST00000617667 426 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 MIR6826-201ENST00000617808 98 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 PWAR1-201ENST00000624188 2414 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 LINC01963-201ENST00000562038 3148 ntBASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SSBP3Q9BWW4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC114546.3-201ENST00000623582 1734 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AL512646.1-201ENST00000269395 1077 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 RNA5SP453-201ENST00000362503 119 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 RN7SKP160-201ENST00000363804 340 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 Y_RNA.255-201ENST00000364581 97 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 MIR551A-201ENST00000385042 96 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 RN7SKP222-201ENST00000410651 315 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 Z93019.1-201ENST00000416450 973 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC127526.1-201ENST00000417526 366 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 KRT8P51-201ENST00000438938 274 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC104651.2-201ENST00000447549 528 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 TCEA1P1-201ENST00000449716 880 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AL450023.1-201ENST00000450868 751 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 MTND4P17-201ENST00000470444 350 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 SIAH1P1-201ENST00000479411 923 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 RPL7P6-201ENST00000480903 738 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC233702.1-201ENST00000482905 502 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 BX510359.5-201ENST00000515651 304 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 RNU6-714P-201ENST00000516963 103 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 RN7SKP99-201ENST00000517028 307 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 SNORA25.17-201ENST00000517184 124 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 COX6CP5-201ENST00000527162 228 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AP003072.2-201ENST00000527756 676 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 PMS2P3-207ENST00000529061 717 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 CYP2C61P-201ENST00000604072 290 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC021646.1-201ENST00000605469 484 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AC022467.1-201ENST00000614738 749 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 MTND4LP32-201ENST00000636111 270 ntBASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
SSBP3Q9BWW4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SSBP3Q9BWW4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSBP3Q9BWW4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSBP3Q9BWW4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.65□□□□□ -1.66
SSBP3Q9BWW4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSBP3Q9BWW4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSBP3Q9BWW4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.65□□□□□ -1.66
SSBP3Q9BWW4 AC006020.1-201ENST00000420179 1854 ntBASIC4.65□□□□□ -1.66
SSBP3Q9BWW4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSBP3Q9BWW4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SSBP3Q9BWW4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 MIR133A2-201ENST00000347538 102 ntBASIC4.65□□□□□ -1.67
SSBP3Q9BWW4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms