Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 IGKV2-18-201ENST00000522607 343 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC040926.1-201ENST00000530195 238 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC063949.1-201ENST00000552900 865 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC044860.2-201ENST00000561005 179 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 AL590032.1-201ENST00000604920 252 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC092266.1-201ENST00000610958 165 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PHOX2BQ99453 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.74□□□□□ -1.33
PHOX2BQ99453 AC009229.4-201ENST00000623854 1947 ntBASIC6.74□□□□□ -1.33
PHOX2BQ99453 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 AC008957.3-201ENST00000624112 2242 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 AC004158.1-201ENST00000564508 4319 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 RNA5SP321-201ENST00000362722 111 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 SMIM11P1-201ENST00000369586 178 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 SNORA51.9-201ENST00000384295 124 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 Y_RNA.551-201ENST00000384661 102 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 Y_RNA.577-201ENST00000384794 101 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 RN7SKP106-201ENST00000410832 272 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 AC011933.1-201ENST00000413334 321 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 RPL34P19-201ENST00000415903 342 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 AL355433.1-201ENST00000422804 300 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 RPS12P5-201ENST00000423449 371 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 RN7SL180P-201ENST00000466769 294 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 RPL17P19-201ENST00000489069 552 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 AL136038.1-201ENST00000497246 351 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 RNA5SP362-201ENST00000516048 118 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 SNRPCP6-201ENST00000528310 210 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 RPL23AP84-201ENST00000571193 464 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 AL512652.1-201ENST00000619006 500 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 AC110801.1-201ENST00000623590 212 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 AC073488.3-201ENST00000631611 778 ntBASIC6.73□□□□□ -1.33
PHOX2BQ99453 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PHOX2BQ99453 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PHOX2BQ99453 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
PHOX2BQ99453 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.72□□□□□ -1.33
PHOX2BQ99453 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PHOX2BQ99453 AC008669.1-201ENST00000565823 2178 ntBASIC6.72□□□□□ -1.33
PHOX2BQ99453 AKAP17BP-201ENST00000431706 2719 ntBASIC6.72□□□□□ -1.33
PHOX2BQ99453 ZNF806-201ENST00000438300 1774 ntBASIC6.72□□□□□ -1.33
PHOX2BQ99453 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PHOX2BQ99453 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PHOX2BQ99453 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PHOX2BQ99453 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PHOX2BQ99453 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PHOX2BQ99453 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PHOX2BQ99453 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PHOX2BQ99453 OR52B3P-201ENST00000314715 928 ntBASIC6.72□□□□□ -1.33
PHOX2BQ99453 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
PHOX2BQ99453 Y_RNA.480-201ENST00000384364 102 ntBASIC6.72□□□□□ -1.33
PHOX2BQ99453 Y_RNA.562-201ENST00000384695 113 ntBASIC6.72□□□□□ -1.33
PHOX2BQ99453 AP000580.1-201ENST00000404439 358 ntBASIC6.72□□□□□ -1.33
PHOX2BQ99453 RBMY1KP-201ENST00000423480 476 ntBASIC6.72□□□□□ -1.33
PHOX2BQ99453 OSTCP4-201ENST00000424397 449 ntBASIC6.72□□□□□ -1.33
PHOX2BQ99453 AL445928.1-201ENST00000435545 222 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms