Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 RNA5SP283-201ENST00000365604 119 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AC007066.1-201ENST00000392902 381 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 SNORD88.1-201ENST00000408684 91 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AC109583.1-201ENST00000432156 268 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AL590399.6-201ENST00000446396 307 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AC115115.1-201ENST00000449927 248 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 GAPDHP36-201ENST00000480688 918 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 KLHL2P1-201ENST00000508691 521 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 RN7SKP277-201ENST00000516895 283 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 MIR5685-201ENST00000579080 79 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AC078899.3-201ENST00000599065 212 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 BDH2P1-201ENST00000602288 736 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 MTCO2P22-201ENST00000603246 681 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AC010591.1-201ENST00000603941 649 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AL627309.6-201ENST00000606857 840 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AL591516.1-201ENST00000611326 274 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AC090617.7-201ENST00000623952 126 ntBASIC2.44□□□□□ -2.02
AP1S3Q96PC3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.44□□□□□ -2.02
AP1S3Q96PC3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 MTCO1P8-201ENST00000416914 1523 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AL161431.1-201ENST00000618966 4205 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 USP9YP36-201ENST00000424581 829 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 RPL7P2-201ENST00000427639 268 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 RPS24P8-201ENST00000431490 402 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 RPL17P49-201ENST00000443728 411 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 ST13P14-201ENST00000474095 734 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC118282.1-201ENST00000506408 765 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 FCF1P8-201ENST00000510322 597 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC119751.1-201ENST00000513357 765 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 RN7SKP13-201ENST00000515933 244 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 RN7SKP18-201ENST00000516005 275 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 SNORA70.18-201ENST00000516696 98 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 RN7SKP116-201ENST00000516902 319 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 OR4R3P-201ENST00000525084 838 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 SNORD84-203ENST00000584275 78 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC020914.6-201ENST00000594327 272 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC112230.1-201ENST00000604342 547 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AL023583.1-201ENST00000607518 1143 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC099676.1-201ENST00000608886 657 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AP000676.4-201ENST00000624659 623 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 AC119674.1-207ENST00000641355 633 ntBASIC2.43□□□□□ -2.02
AP1S3Q96PC3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
AP1S3Q96PC3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC092447.7-201ENST00000422212 1621 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 RNA5SP197-201ENST00000363357 119 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 RNU6-317P-201ENST00000384031 107 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms