Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
CCDC97Q96F63 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.34□□□□□ -1.4
CCDC97Q96F63 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 BDP1P-201ENST00000582658 1990 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 RNU6-1155P-201ENST00000363554 107 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 RN7SKP275-201ENST00000364626 301 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 RNU4-20P-201ENST00000365601 151 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 MIR135A2-201ENST00000384854 100 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 MIR514A2-201ENST00000385131 88 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 MIR514A3-201ENST00000385132 88 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 RNU6-903P-201ENST00000391270 109 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 RN7SKP32-201ENST00000410167 303 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 RNU2-29P-201ENST00000410423 189 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC016769.2-201ENST00000414815 475 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 RPS17P17-201ENST00000419392 409 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC018630.2-202ENST00000422992 927 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 ERLEC1P1-201ENST00000433806 578 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AL359265.2-201ENST00000434367 631 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AL162389.1-201ENST00000449233 177 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC008481.1-201ENST00000463278 396 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC006967.1-201ENST00000467608 589 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 RN7SL188P-201ENST00000469842 285 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AL671862.1-201ENST00000515851 349 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC087241.2-201ENST00000535801 324 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 HNRNPCP4-201ENST00000571636 900 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 MIR4703-201ENST00000577728 79 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 MIR4795-201ENST00000584182 89 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC026898.1-201ENST00000586404 571 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AL162431.4-201ENST00000604674 411 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 IGHV3-29-201ENST00000604817 344 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 AC104966.1-201ENST00000467010 1464 ntBASIC6.33□□□□□ -1.4
CCDC97Q96F63 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC97Q96F63 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC97Q96F63 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC97Q96F63 TAB3P1-202ENST00000452645 1634 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 AC011504.1-201ENST00000623331 4103 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 AC006026.1-201ENST00000444025 1803 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC97Q96F63 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC97Q96F63 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC97Q96F63 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC97Q96F63 EXOC5P1-201ENST00000510543 1969 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 AL139276.1-201ENST00000311910 1001 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 RNU6-510P-201ENST00000391239 108 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 AL157702.1-201ENST00000398764 426 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 AL606923.1-201ENST00000406616 190 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 RNU4-34P-201ENST00000410431 124 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 RN7SKP29-201ENST00000410957 272 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 RPS7P15-201ENST00000415804 584 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 AL161631.1-201ENST00000417933 486 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC97Q96F63 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC97Q96F63 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC97Q96F63 AC092967.1-201ENST00000449016 481 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC97Q96F63 AC011476.1-201ENST00000466725 307 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 RN7SL214P-201ENST00000487317 265 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 RPL7P51-201ENST00000490532 749 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 OR4D12P-201ENST00000509361 911 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC97Q96F63 RNU7-30P-201ENST00000516835 62 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 RNU6-1314P-201ENST00000517139 104 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 AC073581.1-201ENST00000519036 575 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC97Q96F63 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC97Q96F63 AL034351.1-201ENST00000605288 668 ntBASIC6.32□□□□□ -1.4
CCDC97Q96F63 RNU6-89P-201ENST00000606519 100 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms