Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AP003072.2-201ENST00000527756 676 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AP000648.1-201ENST00000529682 397 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 OR5AN2P-201ENST00000534535 896 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AC092121.1-201ENST00000569452 202 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 MIR3146-201ENST00000580367 79 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AC060771.1-201ENST00000582031 164 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AL356055.1-201ENST00000602528 446 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 RPL26P30-202ENST00000602923 645 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AC025588.3-201ENST00000604182 274 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 BNIP3P10-201ENST00000605360 577 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AL136295.6-201ENST00000610486 658 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AC126175.1-201ENST00000617041 758 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 AL451142.2-201ENST00000429076 2090 ntBASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXRED1Q96CU9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 CKAP2P1-201ENST00000555477 2049 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 SMG1P4-204ENST00000523028 4131 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 RNA5SP273-201ENST00000362484 113 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 RNA5SP30-201ENST00000365552 115 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 RNU6-108P-201ENST00000365558 107 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 OR1L6-202ENST00000373684 1044 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 RPS4XP8-201ENST00000402039 771 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 RNU2-15P-201ENST00000410692 191 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 MRPL53P1-201ENST00000414323 319 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 UQCRBP1-201ENST00000421129 336 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 GPR143P-201ENST00000434155 205 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 EIF4A1P11-201ENST00000451239 222 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 HLA-DPA3-207ENST00000454398 229 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 RPL32P33-201ENST00000487023 394 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC009120.1-201ENST00000493458 473 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 ENPP7P11-201ENST00000505915 627 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 RNA5SP228-201ENST00000516232 133 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 TRIM51DP-201ENST00000529746 596 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 RAB11AP2-201ENST00000545905 639 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 HAUS8P1-201ENST00000549005 542 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 LSM3P2-201ENST00000551246 273 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 HIF1AP1-201ENST00000553642 175 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC127024.5-201ENST00000580085 462 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC112230.1-201ENST00000604342 547 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 YWHAEP7-203ENST00000622054 312 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AP003400.5-201ENST00000624827 617 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 AC107027.3-201ENST00000565095 3473 ntBASIC4.79□□□□□ -1.64
FOXRED1Q96CU9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms