Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MTND1P20-201ENST00000430341 950 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AL450263.2-201ENST00000439400 589 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC012671.1-201ENST00000451912 203 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 MTCO3P16-201ENST00000454456 754 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC091153.1-201ENST00000466297 402 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 RNF138P1-201ENST00000502765 546 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC011260.1-201ENST00000578420 472 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AP005136.1-201ENST00000579765 429 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC004987.4-201ENST00000603383 338 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC083899.3-201ENST00000603413 594 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 RNF138P2-201ENST00000603490 592 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC018816.2-201ENST00000621460 353 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC007494.3-201ENST00000624660 743 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 AC079228.1-201ENST00000624774 1049 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 U6.101-201ENST00000637707 76 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 CPHL1P-201ENST00000461341 3407 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 EIF2AP4-201ENST00000424793 1781 ntBASIC4.49□□□□□ -1.69
HMGB4Q8WW32 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGB4Q8WW32 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 RNU1-13P-201ENST00000384499 162 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 Y_RNA.560-201ENST00000384689 102 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 MIR23B-201ENST00000384832 97 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 EIF5P1-201ENST00000400019 1231 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AL021407.1-201ENST00000404531 386 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 OR8G2P-201ENST00000412796 908 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 RPS15AP38-201ENST00000413110 372 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 RPL36AP10-201ENST00000421785 322 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC008065.1-201ENST00000428525 348 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 MTCYBP39-201ENST00000437562 491 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC118469.1-201ENST00000442943 488 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 OR6C5P-201ENST00000452388 923 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC097493.1-201ENST00000463958 372 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 RPL37P6-202ENST00000464216 403 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC114981.1-201ENST00000503897 678 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC026412.2-201ENST00000512270 1075 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC104986.1-201ENST00000517978 436 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC239860.2-201ENST00000525886 270 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 OR4A45P-201ENST00000529954 901 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AL161713.1-201ENST00000555538 145 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 RN7SL435P-201ENST00000584418 282 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC015726.1-201ENST00000602353 681 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC064807.4-201ENST00000607201 407 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC015914.2-201ENST00000618167 288 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 uc_338.13-201ENST00000618243 179 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC091965.5-201ENST00000624785 342 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 AC099063.3-201ENST00000642066 185 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 DDX43P2-201ENST00000604753 1354 ntBASIC4.48□□□□□ -1.69
HMGB4Q8WW32 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 LINC00622-201ENST00000562811 1570 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms