Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RPL23AP73-201ENST00000492507 471 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC097462.2-201ENST00000504623 481 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AL163642.2-201ENST00000604722 1019 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC090116.1-201ENST00000615679 446 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.29□□□□□ -1.72
SNED1Q8TER0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SNED1Q8TER0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.29□□□□□ -1.72
SNED1Q8TER0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNED1Q8TER0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNED1Q8TER0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNED1Q8TER0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SNED1Q8TER0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNED1Q8TER0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 ZNF29P-201ENST00000225587 168 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNED1Q8TER0 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SNED1Q8TER0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 RNU6-618P-201ENST00000363518 112 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 U3.19-201ENST00000390893 196 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 TRGV6-201ENST00000417928 299 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 RPS26P47-201ENST00000427219 348 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 NANOGP6-201ENST00000429190 847 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 ARL5AP3-201ENST00000439327 386 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC099563.1-201ENST00000456086 418 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC010469.1-201ENST00000463864 576 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC011825.1-201ENST00000484967 388 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC080014.1-201ENST00000496877 1201 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC125611.1-201ENST00000549563 229 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC067852.3-201ENST00000589177 561 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC123786.2-201ENST00000603459 275 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.28□□□□□ -1.72
SNED1Q8TER0 AP003355.3-201ENST00000623465 114 ntBASIC4.28□□□□□ -1.72
SNED1Q8TER0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNED1Q8TER0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNED1Q8TER0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNED1Q8TER0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNED1Q8TER0 SAGE2P-201ENST00000420011 2126 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNED1Q8TER0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNED1Q8TER0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNED1Q8TER0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNED1Q8TER0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNED1Q8TER0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 FRG1CP-201ENST00000358464 769 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 SNORD51.1-201ENST00000365405 77 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 U3.26-201ENST00000391236 204 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 GSTA8P-201ENST00000404253 637 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 KATNBL1P3-201ENST00000443475 909 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AP001992.1-205ENST00000462248 379 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 SNORA76.2-201ENST00000517095 137 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 MTCO1P47-201ENST00000523889 1271 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AC074029.2-201ENST00000551045 634 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AC008088.1-201ENST00000580993 280 ntBASIC4.27□□□□□ -1.73
SNED1Q8TER0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNED1Q8TER0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNED1Q8TER0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.27□□□□□ -1.73
SNED1Q8TER0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNED1Q8TER0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNED1Q8TER0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNED1Q8TER0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms