Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC055855.1-201ENST00000489563 579 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC111000.3-201ENST00000508057 576 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC139365.2-201ENST00000517972 253 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC090572.1-201ENST00000519251 160 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC100784.1-201ENST00000522790 310 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 MIR3614-201ENST00000581261 86 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC060771.1-201ENST00000582031 164 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC008521.2-201ENST00000591021 259 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC115621.1-201ENST00000604653 858 ntBASIC5.66□□□□□ -1.5
PHC3Q8NDX5 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHC3Q8NDX5 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC006026.1-201ENST00000444025 1803 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 MFSD8-239ENST00000641590 2479 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 Z95327.2-201ENST00000414579 1873 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 RNU6-359P-201ENST00000365466 108 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 RNA5SP487-201ENST00000410186 122 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 RNU6-1068P-201ENST00000410958 103 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 RNF10P1-201ENST00000418589 369 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 CYCSP12-201ENST00000437729 300 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC093156.1-201ENST00000440382 670 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 RPL36AP39-201ENST00000445859 318 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC104651.2-201ENST00000447549 528 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 RNU7-63P-201ENST00000459054 62 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 PPIAP21-201ENST00000464473 501 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC006539.1-201ENST00000481419 501 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 RN7SL570P-201ENST00000484405 292 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 RPL32P33-201ENST00000487023 394 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AK3P4-201ENST00000504283 583 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC106872.4-201ENST00000510050 523 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 CYCSP22-201ENST00000517555 339 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 OR8L1P-201ENST00000534005 955 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC243972.3-201ENST00000539655 198 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.65□□□□□ -1.5
PHC3Q8NDX5 KC877982.1-201ENST00000602313 470 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AL133481.2-203ENST00000607558 139 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 OR6R2P-201ENST00000609216 300 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 MIR6133-201ENST00000617057 108 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 AC022106.2-201ENST00000620114 757 ntBASIC5.65□□□□□ -1.5
PHC3Q8NDX5 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.51
PHC3Q8NDX5 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PHC3Q8NDX5 AC107027.3-201ENST00000565095 3473 ntBASIC5.65□□□□□ -1.51
PHC3Q8NDX5 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AC006210.2-201ENST00000367074 1545 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 RN7SKP78-201ENST00000364711 318 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 ARL4AP5-201ENST00000404372 599 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 GPS2P1-201ENST00000411761 986 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 AL389925.1-201ENST00000432257 728 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 RPL23AP30-201ENST00000432419 501 ntBASIC5.64□□□□□ -1.51
PHC3Q8NDX5 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.64□□□□□ -1.51
PHC3Q8NDX5 OR7E116P-201ENST00000448529 957 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms