Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.55□□□□□ -2
TTC9CQ8N5M4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.55□□□□□ -2
TTC9CQ8N5M4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
TTC9CQ8N5M4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TTC9CQ8N5M4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 MTCO1P12-201ENST00000414273 1543 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
TTC9CQ8N5M4 SNORD56.3-201ENST00000363507 71 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.54□□□□□ -2
TTC9CQ8N5M4 OR6K3-202ENST00000368146 996 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 SNORA26.7-201ENST00000391288 122 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 AL354719.1-201ENST00000406535 843 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 AC069157.1-201ENST00000421749 137 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 RPF2P1-201ENST00000424137 906 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 RPL23AP4-201ENST00000427757 463 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.54□□□□□ -2
TTC9CQ8N5M4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 COX6CP2-201ENST00000444980 225 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 AC146507.2-201ENST00000460608 476 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TTC9CQ8N5M4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 AC005912.1-201ENST00000495392 255 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 MTCO3P24-201ENST00000572729 782 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 CKS1BP3-201ENST00000600888 237 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 YWHAQP7-201ENST00000603536 658 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 AC009464.1-201ENST00000615731 469 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 AC121761.2-201ENST00000617300 689 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 AC006065.5-201ENST00000623427 349 ntBASIC2.54□□□□□ -2
TTC9CQ8N5M4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
TTC9CQ8N5M4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
TTC9CQ8N5M4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.54□□□□□ -2
TTC9CQ8N5M4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.54□□□□□ -2
TTC9CQ8N5M4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TTC9CQ8N5M4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.53□□□□□ -2
TTC9CQ8N5M4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TTC9CQ8N5M4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.53□□□□□ -2
TTC9CQ8N5M4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AL122126.1-201ENST00000546905 1318 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
TTC9CQ8N5M4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TTC9CQ8N5M4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TTC9CQ8N5M4 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 MIR183-201ENST00000384958 110 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC007899.1-201ENST00000412776 775 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC006960.1-201ENST00000419980 153 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 HMGB1P12-201ENST00000438594 598 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AL590639.1-201ENST00000456484 337 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC008155.2-201ENST00000464337 397 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 ST13P14-201ENST00000474095 734 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 OR5H4P-201ENST00000510851 923 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC108043.1-201ENST00000512696 574 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC108471.1-201ENST00000513977 287 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC239860.2-201ENST00000525886 270 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC015849.2-201ENST00000605738 409 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC131902.3-201ENST00000611767 581 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC243654.2-201ENST00000612843 443 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 LRRC77P-213ENST00000637727 880 ntBASIC2.53□□□□□ -2
TTC9CQ8N5M4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
TTC9CQ8N5M4 AL136164.4-201ENST00000625013 2135 ntBASIC2.53□□□□□ -2.01
TTC9CQ8N5M4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
TTC9CQ8N5M4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TTC9CQ8N5M4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TTC9CQ8N5M4 AL157700.1-201ENST00000561973 1432 ntBASIC2.52□□□□□ -2.01
TTC9CQ8N5M4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms