Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RPS29P10-201ENST00000439197 166 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 CBX1P1-201ENST00000440184 427 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 FAM103A2P-201ENST00000444122 354 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 PMCHL2-203ENST00000457791 237 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC022364.2-201ENST00000457963 554 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 RPL32P9-201ENST00000487963 407 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC090453.1-201ENST00000495560 436 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 MTND3P22-201ENST00000510932 243 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 RNA5SP373-201ENST00000517271 95 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC022360.1-201ENST00000521058 340 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 HIF1AP1-201ENST00000553642 175 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AL358913.1-201ENST00000554342 121 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AL359212.1-201ENST00000556608 614 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 PSMA6P4-201ENST00000603247 718 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC006363.1-201ENST00000603806 463 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AL035413.2-201ENST00000604801 525 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AL009028.1-201ENST00000604895 802 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC135068.12-201ENST00000637370 931 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AP000550.3-201ENST00000637734 379 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC083899.1-201ENST00000454465 3819 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC009962.1-201ENST00000567327 3813 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 KPNA2P2-201ENST00000419546 1489 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 RNU6-744P-201ENST00000365557 107 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 SNORA51.6-201ENST00000384151 125 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 RNU6-1316P-201ENST00000384242 108 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 ZNF90P2-204ENST00000419323 1075 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 NPM1P24-201ENST00000428039 894 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 USP9YP9-201ENST00000429406 715 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AL161722.2-201ENST00000434731 981 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 FHP1-201ENST00000442741 703 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 RPL7AP6-201ENST00000477943 801 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC018797.3-201ENST00000513388 1241 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 RNU6-714P-201ENST00000516963 103 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC022616.6-201ENST00000520479 119 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC092490.3-201ENST00000545370 572 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC108738.1-201ENST00000603703 237 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC010133.1-201ENST00000615809 842 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC099494.2-201ENST00000623371 978 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC006065.6-201ENST00000625201 545 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC010149.2-201ENST00000637608 315 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC009313.2-201ENST00000417893 1941 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 RPS4XP5-202ENST00000449995 1334 ntBASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM48Q8IWZ4 AC092376.2-201ENST00000622621 4116 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms