Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RNF43Q68DV7 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RNF43Q68DV7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.84□□□□□ -1.47
RNF43Q68DV7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RNF43Q68DV7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RNF43Q68DV7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RNF43Q68DV7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RNF43Q68DV7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC007938.2-201ENST00000604666 2634 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC073343.1-201ENST00000328239 651 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 Y_RNA.28-201ENST00000362554 111 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 Y_RNA.197-201ENST00000364004 102 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 RNA5SP91-201ENST00000390902 119 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 MIR548F4-201ENST00000408515 105 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 RNU2-8P-201ENST00000410727 190 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC009302.1-201ENST00000417147 390 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC092634.6-201ENST00000418558 192 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC092017.2-201ENST00000427600 362 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 UBE2V1P5-201ENST00000440070 405 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 TCEA1P1-201ENST00000449716 880 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 TRGVB-201ENST00000453257 471 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC239798.3-201ENST00000454459 408 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 NF1P3-201ENST00000457709 450 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 EIF4EP3-201ENST00000498782 656 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 NPM1P41-201ENST00000512920 831 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 RNU6-1003P-201ENST00000517099 105 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 SNORA25.17-201ENST00000517184 124 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 RNU6-988P-201ENST00000519081 107 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC022861.1-201ENST00000522981 663 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 SNRPGP18-201ENST00000553000 214 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 FAM106CP-201ENST00000582212 507 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC113194.1-201ENST00000606037 500 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC005014.2-201ENST00000607795 599 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 AL121612.2-201ENST00000612261 482 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC022106.2-201ENST00000620114 757 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 uc_338.22-201ENST00000622722 187 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RNF43Q68DV7 DBF4P1-201ENST00000412976 1892 ntBASIC5.83□□□□□ -1.48
RNF43Q68DV7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.83□□□□□ -1.48
RNF43Q68DV7 AC005261.2-201ENST00000593427 4258 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 ELL2P4-201ENST00000446870 1376 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 OR4G1P-203ENST00000641984 1631 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 RNU6-702P-201ENST00000364982 107 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 RNU1-136P-201ENST00000384181 164 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 RNY4P36-201ENST00000391116 96 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 RNA5SP105-201ENST00000391123 113 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 RPL23AP32-201ENST00000395315 459 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 NPM1P38-201ENST00000403835 865 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 COX6CP17-201ENST00000421389 185 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AC006335.2-201ENST00000437993 330 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AL450996.1-201ENST00000445574 1202 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 RN7SL172P-201ENST00000460535 303 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 RPS23P2-201ENST00000463671 415 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 AC010655.3-201ENST00000478818 450 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms