Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 DDX18P3-201ENST00000404856 2007 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 ATF1P1-201ENST00000406040 927 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 OR51A3P-201ENST00000413596 924 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 RPS4XP22-201ENST00000480755 780 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 RNU6-1231P-201ENST00000517185 103 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 AC025811.1-201ENST00000604312 472 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 AL355493.4-201ENST00000618530 292 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 RAD1P1-201ENST00000231383 813 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 HMGB3P8-201ENST00000449709 577 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 TGIF1P1-201ENST00000558095 802 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 AC004972.1-201ENST00000623934 2209 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 AL445529.1-201ENST00000398713 389 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 AC021146.1-201ENST00000511202 716 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 AC008507.1-201ENST00000587506 734 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 AC103810.6-201ENST00000606708 136 ntBASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VPS13DQ5THJ4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 RNA5SP184-201ENST00000411071 108 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 PPIAP17-201ENST00000438507 471 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AL589765.3-201ENST00000446084 462 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AC117522.3-201ENST00000507974 584 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 RPL7P12-201ENST00000446719 750 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AC111000.2-201ENST00000507775 550 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 OR5G4P-201ENST00000525251 760 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 MIR4648-201ENST00000580107 72 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AC124856.1-201ENST00000600819 896 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AC022960.2-201ENST00000616300 666 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AL356321.1-201ENST00000621360 228 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AL049555.1-201ENST00000562834 1933 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AC005005.4-201ENST00000623789 16698 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 HSPD1P16-201ENST00000402302 394 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 ZNF603P-201ENST00000405613 487 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AP000936.3-201ENST00000438127 255 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 HMGN1P18-201ENST00000457642 277 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AP003102.1-201ENST00000525638 661 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 ATP5F1P5-201ENST00000526403 760 ntBASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VPS13DQ5THJ4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 SNORA9.2-201ENST00000365361 133 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 HMGB1P18-201ENST00000438801 619 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC245166.1-201ENST00000521012 253 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC104446.1-201ENST00000613728 1321 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 RNU1-112P-201ENST00000364401 164 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC002524.1-201ENST00000411687 547 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AL356490.1-201ENST00000623079 479 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC099063.3-201ENST00000642066 185 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 FAM103A2P-201ENST00000444122 354 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC021205.1-201ENST00000468797 348 ntBASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.91□□□□□ -2.1
VPS13DQ5THJ4 OOSP1P2-201ENST00000579644 351 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms