Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 HMGB1P23-201ENST00000518743 568 ntBASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 OR4C2P-201ENST00000530855 1064 ntBASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 MIR1254-2-201ENST00000579553 63 ntBASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 CBX3P2-202ENST00000583365 535 ntBASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 AL162233.1-201ENST00000620014 944 ntBASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 SNORD39.4-201ENST00000620099 78 ntBASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 AL356321.1-201ENST00000621360 228 ntBASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 OR8B1P-202ENST00000641132 1178 ntBASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.5□□□□□ -1.85
PTPN20Q4JDL3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC234772.1-201ENST00000377927 937 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 RNU6-356P-201ENST00000384140 107 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 RNA5SP229-201ENST00000410809 99 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 ZNF965P-201ENST00000432501 817 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC044797.1-201ENST00000445744 679 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC239367.2-201ENST00000447309 705 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 TPRKBP1-201ENST00000456243 481 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 RPS4XP10-201ENST00000465034 731 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC078918.1-201ENST00000498515 228 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC021678.1-201ENST00000505195 936 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 APOOP4-201ENST00000513530 597 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 MIR5047-201ENST00000579212 100 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC015917.1-201ENST00000579654 510 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC112503.1-201ENST00000608436 391 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 AC015967.1-201ENST00000619893 476 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 GTF2H2B-203ENST00000508065 1432 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PTPN20Q4JDL3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 MTND4P31-201ENST00000425607 1343 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AF127577.6-201ENST00000623352 2191 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC007496.3-201ENST00000624987 3443 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AL049737.1-201ENST00000413920 1403 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 PTP4A1P5-201ENST00000420305 455 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC012065.2-201ENST00000421295 375 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 MTND4P24-201ENST00000424002 397 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC097713.2-201ENST00000430199 356 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 RSL24D1P8-201ENST00000434442 492 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 RPL6P5-201ENST00000445678 828 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 NPM1P49-201ENST00000448027 714 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC025181.1-201ENST00000477507 416 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AP004242.1-201ENST00000533701 349 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC103710.3-201ENST00000608157 948 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC012531.5-201ENST00000611375 151 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 uc_338.1-201ENST00000612113 180 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AC104307.1-201ENST00000616142 196 ntBASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTPN20Q4JDL3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms