Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SHROOM1Q2M3G4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM1Q2M3G4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHROOM1Q2M3G4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SHROOM1Q2M3G4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.15□□□□□ -1.74
SHROOM1Q2M3G4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 SNORA48.2-201ENST00000390926 124 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 RNU4-27P-201ENST00000410889 139 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC004987.3-201ENST00000413879 771 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC009237.5-201ENST00000414271 501 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC023128.2-201ENST00000420880 1223 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 CYCSP32-201ENST00000440548 321 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AL591503.2-201ENST00000442314 1005 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC008628.1-201ENST00000508663 265 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 RNU2-27P-201ENST00000516185 142 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 IGKV2-26-201ENST00000518305 343 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC011471.1-201ENST00000585766 187 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AL354976.1-201ENST00000613843 387 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 MIR7112-201ENST00000616126 65 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 MIR4727-201ENST00000622232 55 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AL732618.1-201ENST00000623251 301 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC048347.1-201ENST00000624621 427 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 FAM157B-203ENST00000639350 358 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 AC097504.1-201ENST00000515103 2415 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 FAM35DP-201ENST00000323387 2712 ntBASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.15□□□□□ -1.75
SHROOM1Q2M3G4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC000367.1-201ENST00000452711 1766 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AL645937.1-201ENST00000641739 1652 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 HMGB1P10-201ENST00000395823 563 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 ATP5F1P6-201ENST00000402768 767 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 RPL31P2-201ENST00000413849 377 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC097499.1-201ENST00000444277 208 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 RNU7-170P-201ENST00000459303 61 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 RPL21P104-201ENST00000464143 478 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC084357.1-201ENST00000473404 255 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 RPL7P47-201ENST00000497299 556 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC093755.1-201ENST00000512950 1023 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC133963.2-201ENST00000513686 578 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 MIR2114-201ENST00000516645 80 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 OR4R3P-201ENST00000525084 838 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC025260.1-201ENST00000548858 430 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AGGF1P8-201ENST00000562979 1000 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 AC012254.4-201ENST00000588843 273 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 MIR4278-201ENST00000636094 69 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SHROOM1Q2M3G4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 ZNF833P-201ENST00000424938 1494 ntBASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 AL445183.3-201ENST00000414168 502 ntBASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 MTCO2P1-201ENST00000424648 477 ntBASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 AC006994.1-201ENST00000438212 839 ntBASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 RPS27P5-201ENST00000444247 244 ntBASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 TPTE2P6-202ENST00000445572 1007 ntBASIC4.13□□□□□ -1.75
SHROOM1Q2M3G4 HMGN2P21-201ENST00000447764 270 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms