Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 S100A11P1-201ENST00000477525 312 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 RPS26P15-201ENST00000488067 348 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNTN1Q12860 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNTN1Q12860 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNTN1Q12860 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.83□□□□□ -1.8
CNTN1Q12860 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.83□□□□□ -1.8
CNTN1Q12860 TPT1P8-201ENST00000510120 555 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNTN1Q12860 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.83□□□□□ -1.8
CNTN1Q12860 RNU6-202P-201ENST00000515998 96 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 RNA5SP164-201ENST00000516533 110 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.83□□□□□ -1.8
CNTN1Q12860 RFPL1S-203ENST00000539579 330 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.83□□□□□ -1.8
CNTN1Q12860 CBX3P5-201ENST00000552017 521 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 GTF2IP22-201ENST00000554443 182 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 AL049634.3-201ENST00000604968 457 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 AC017076.1-201ENST00000607613 578 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 AP003392.5-201ENST00000607857 415 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.83□□□□□ -1.8
CNTN1Q12860 CYCSP41-201ENST00000616920 296 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 MIR6075-201ENST00000620782 95 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.83□□□□□ -1.8
CNTN1Q12860 OR4G3P-201ENST00000633500 913 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.83□□□□□ -1.8
CNTN1Q12860 AC024560.2-201ENST00000507981 1497 ntBASIC3.83□□□□□ -1.8
CNTN1Q12860 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
CNTN1Q12860 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNTN1Q12860 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN1Q12860 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN1Q12860 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN1Q12860 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN1Q12860 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.82□□□□□ -1.8
CNTN1Q12860 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.82□□□□□ -1.8
CNTN1Q12860 Y_RNA.578-201ENST00000390903 88 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AC007066.1-201ENST00000392902 381 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 RPL21P17-201ENST00000397467 475 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.82□□□□□ -1.8
CNTN1Q12860 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.82□□□□□ -1.8
CNTN1Q12860 AL449283.1-202ENST00000418249 604 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN1Q12860 OSTCP5-201ENST00000425293 453 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.82□□□□□ -1.8
CNTN1Q12860 AL451062.2-201ENST00000427515 271 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNTN1Q12860 GTF2IP3-201ENST00000433887 494 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 KCTD9P3-201ENST00000434597 1169 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 YWHAZP8-201ENST00000436935 731 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.82□□□□□ -1.8
CNTN1Q12860 AC004854.1-201ENST00000440356 349 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 MTCYBP42-201ENST00000444653 1130 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AL358794.1-201ENST00000445689 381 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 EXTL2P1-201ENST00000446218 416 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.82□□□□□ -1.8
CNTN1Q12860 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.82□□□□□ -1.8
CNTN1Q12860 AC092045.1-201ENST00000495716 1231 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 UBE2V1P12-201ENST00000503954 474 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AC090071.1-201ENST00000507713 644 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 OR5H4P-201ENST00000510851 923 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.82□□□□□ -1.8
CNTN1Q12860 AC022790.1-201ENST00000522872 204 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 MTCO3P15-201ENST00000526563 574 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 LRRC6P1-201ENST00000532188 885 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AC091515.1-201ENST00000548110 679 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.82□□□□□ -1.8
CNTN1Q12860 AC107016.1-201ENST00000550463 337 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AC009101.1-201ENST00000568135 242 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 MIR4666A-201ENST00000580160 79 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 MIR5187-201ENST00000583479 76 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AC017100.2-201ENST00000584628 355 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.82□□□□□ -1.8
CNTN1Q12860 AC105148.1-201ENST00000604961 409 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 AL583856.2-201ENST00000606298 543 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 SNORA51-201ENST00000606420 132 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CNTN1Q12860 MIR6864-201ENST00000617935 70 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.82□□□□□ -1.8
CNTN1Q12860 AL034408.1-202ENST00000636088 415 ntBASIC3.82□□□□□ -1.8
CNTN1Q12860 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CNTN1Q12860 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.82□□□□□ -1.8
CNTN1Q12860 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
CNTN1Q12860 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.82□□□□□ -1.8
CNTN1Q12860 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.82□□□□□ -1.8
CNTN1Q12860 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.81□□□□□ -1.8
CNTN1Q12860 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CNTN1Q12860 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNTN1Q12860 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNTN1Q12860 RN7SKP44-201ENST00000363602 316 ntBASIC3.81□□□□□ -1.8
CNTN1Q12860 AL133412.1-201ENST00000380194 2992 ntBASIC3.81□□□□□ -1.8
CNTN1Q12860 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNTN1Q12860 MIR449B-201ENST00000384995 97 ntBASIC3.81□□□□□ -1.8
CNTN1Q12860 MTCO1P56-201ENST00000401674 224 ntBASIC3.81□□□□□ -1.8
CNTN1Q12860 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.81□□□□□ -1.8
CNTN1Q12860 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.81□□□□□ -1.8
CNTN1Q12860 AC091286.1-201ENST00000431233 461 ntBASIC3.81□□□□□ -1.8
CNTN1Q12860 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.81□□□□□ -1.8
CNTN1Q12860 AL645638.1-201ENST00000440519 361 ntBASIC3.81□□□□□ -1.8
CNTN1Q12860 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.81□□□□□ -1.8
CNTN1Q12860 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms